6M9X | pdb_00006m9x

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6m9xa_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)
Dd6m9xd_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)
Cd6m9xc_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)
Bd6m9xb_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGFP-like 8097410 3000576 SCOP2B (2022-06-29)
DSCOP2 FamilyFluorescent proteins 8097409 4001049 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyGFP-like 8097410 3000576 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyGFP-like 8097410 3000576 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGFP-like 8097410 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGFPe6m9xA1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)
DGFPe6m9xD1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)
CGFPe6m9xC1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)
BGFPe6m9xB1 A: beta barrelsX: GFP-like (From Topology)H: GFP-like (From Topology)T: GFP-likeF: GFPECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF01353Green fluorescent protein (GFP)Green fluorescent proteinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Fluorescent protein lanFP10A- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR011584Green fluorescent protein-relatedFamily
A, B, C, D
IPR009017Green fluorescent proteinHomologous Superfamily