6M6T | pdb_00006m6t

Amylomaltase from Streptococcus agalactiae in complex with acarbose

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d6m6th_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
G	d6m6tg1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
G	d6m6tg2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
F	d6m6tf_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
E	d6m6te1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
E	d6m6te2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
D	d6m6td_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
C	d6m6tc1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
C	d6m6tc3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
C	d6m6tc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
B	d6m6tb1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
B	d6m6tb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)
A	d6m6ta_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Amylase, catalytic domain	automated matches	(Streptococcus agalactiae ) [TaxId: 1311 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
G	SCOP2 Family	Amylase, catalytic domain	8102776	4003138	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	(Trans)glycosidases	8102777	3000313	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Glyco_hydro_77	e6m6tH1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
G	Glyco_hydro_77	e6m6tG1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
F	Glyco_hydro_77	e6m6tF1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
E	Glyco_hydro_77	e6m6tE1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
D	Glyco_hydro_77	e6m6tD1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
C	Glyco_hydro_77	e6m6tC1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
B	Glyco_hydro_77	e6m6tB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)
A	Glyco_hydro_77	e6m6tA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_77	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02446	4-alpha-glucanotransferase (Glyco_hydro_77)	4-alpha-glucanotransferase	These enzymes EC:2.4.1.25 transfer a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	4-alpha-glucanotransferase	glycosyltransferase activity 4-alpha-glucanotransferase activity transferase activity hexosyltransferase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003385	Glycoside hydrolase, family 77	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.