Annotations: 6LRS

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth T]	SCOP2B Superfamily	RuBisCO small subunit	8094084	3001622	SCOP2B (2022-06-29)
D [auth S]	SCOP2B Superfamily	RuBisCO small subunit	8094084	3001622	SCOP2B (2022-06-29)
G [auth R]	SCOP2B Superfamily	RuBisCO small subunit	8094084	3001622	SCOP2B (2022-06-29)
J [auth Q]	SCOP2B Superfamily	RuBisCO small subunit	8094084	3001622	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth G]	PF02788	e6lrsG2	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
B [auth G]	PF00016	e6lrsG1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
C [auth H]	PF02788	e6lrsH1	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
C [auth H]	PF00016	e6lrsH2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
E	PF02788	e6lrsE2	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
E	PF00016	e6lrsE1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
F	PF02788	e6lrsF1	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
F	PF00016	e6lrsF2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
H [auth C]	PF02788	e6lrsC1	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
H [auth C]	PF00016	e6lrsC2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
I [auth D]	PF02788	e6lrsD2	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
I [auth D]	PF00016	e6lrsD1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
K [auth A]	PF02788	e6lrsA1	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
K [auth A]	PF00016	e6lrsA2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
L [auth B]	PF02788	e6lrsB2	A: a+b two layers	X: Alpha-beta plaits	H: RuBisCO, large subunit, small (N-terminal) domain (From Topology)	T: RuBisCO, large subunit, small (N-terminal) domain	F: PF02788	ECOD (1.6)
L [auth B]	PF00016	e6lrsB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00016	ECOD (1.6)
A [auth T]	PF00101	e6lrsT1	A: a+b two layers	X: Reverse ferredoxin	H: RuBisCO, small subunit (From Topology)	T: RuBisCO, small subunit	F: PF00101	ECOD (1.6)
D [auth S]	PF00101	e6lrsS1	A: a+b two layers	X: Reverse ferredoxin	H: RuBisCO, small subunit (From Topology)	T: RuBisCO, small subunit	F: PF00101	ECOD (1.6)
G [auth R]	PF00101	e6lrsR1	A: a+b two layers	X: Reverse ferredoxin	H: RuBisCO, small subunit (From Topology)	T: RuBisCO, small subunit	F: PF00101	ECOD (1.6)
J [auth Q]	PF00101	e6lrsQ1	A: a+b two layers	X: Reverse ferredoxin	H: RuBisCO, small subunit (From Topology)	T: RuBisCO, small subunit	F: PF00101	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth T]	3.30.190.10	Alpha Beta	2-Layer Sandwich	Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase	Ribulose bisphosphate carboxylase, small subunit	CATH (utative)
D [auth S]	3.30.190.10	Alpha Beta	2-Layer Sandwich	Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase	Ribulose bisphosphate carboxylase, small subunit	CATH (utative)
G [auth R]	3.30.190.10	Alpha Beta	2-Layer Sandwich	Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase	Ribulose bisphosphate carboxylase, small subunit	CATH (utative)
J [auth Q]	3.30.190.10	Alpha Beta	2-Layer Sandwich	Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase	Ribulose bisphosphate carboxylase, small subunit	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)	Ribulose bisphosphate carboxylase large chain, N-terminal domain	The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold.	Domain
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)	Ribulose bisphosphate carboxylase large chain, catalytic domain	The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.	Domain
A [auth T], D [auth S], G [auth R], J [auth Q]	PF00101	Ribulose bisphosphate carboxylase, small chain (RuBisCO_small)	Ribulose bisphosphate carboxylase, small chain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	Ribulose bisphosphate carboxylase large chain	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity monooxygenase activity oxidoreductase activity	cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process organic substance metabolic process biosynthetic process reductive pentose-phosphate cycle organic substance biosynthetic process cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process organic substance metabolic process biosynthetic process reductive pentose-phosphate cycle organic substance biosynthetic process carbon fixation	intracellular organelle bacterial microcompartment intracellular anatomical structure organelle carboxysome intracellular non-membrane-bounded organelle cellular anatomical entity non-membrane-bounded organelle
A [auth T], D [auth S], G [auth R], J [auth Q]	Ribulose bisphosphate carboxylase small chain	ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process organic substance metabolic process biosynthetic process reductive pentose-phosphate cycle organic substance biosynthetic process cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process organic substance metabolic process biosynthetic process reductive pentose-phosphate cycle organic substance biosynthetic process carbon fixation	intracellular organelle bacterial microcompartment intracellular anatomical structure organelle carboxysome intracellular non-membrane-bounded organelle cellular anatomical entity non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR020888	Ribulose bisphosphate carboxylase large subunit, type I	Family
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	Homologous Superfamily
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	Active Site
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	Domain
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR033966	RuBisCO	Family
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	Domain
B [auth G], C [auth H], E, F, H [auth C], B [auth G], C [auth H], E, F, H [auth C], I [auth D], K [auth A], L [auth B]	IPR036422	RuBisCO large subunit, N-terminal domain superfamily	Homologous Superfamily
A [auth T], D [auth S], G [auth R], J [auth Q]	IPR036385	Ribulose bisphosphate carboxylase, small subunit superfamily	Homologous Superfamily
A [auth T], D [auth S], G [auth R], J [auth Q]	IPR024681	Ribulose bisphosphate carboxylase, small subunit	Family
A [auth T], D [auth S], G [auth R], J [auth Q]	IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	Domain