6LRD | pdb_00006lrd

Structure of RecJ complexed with a 5'-P-dSpacer-modified ssDNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ArecJe6lrdA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: recJECOD (1.6)
ADHHA1e6lrdA2 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: DHHA1ECOD (1.6)
ADHHe6lrdA3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: DHHECOD (1.6)
AEUF08603e6lrdA4 A: a/b three-layered sandwichesX: Single-stranded-DNA-specific exonuclease RecJ C-terminal domain (From Topology)H: Single-stranded-DNA-specific exonuclease RecJ C-terminal domain (From Topology)T: Single-stranded-DNA-specific exonuclease RecJ C-terminal domainF: EUF08603ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth B]ASP-LEU-PRO-PHE---
B [auth C]DNA (5'-D(P*(3DR)P*TP*TP*TP*TP*T)-3')---
Single-stranded-DNA-specific exonuclease -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR004610Bacterial RecJ exonucleaseFamily
IPR001667DDH domainDomain
IPR038763DHH phosphoesterase superfamilyHomologous Superfamily
IPR003156DHHA1 domainDomain
IPR048918Single-stranded-DNA-specific exonuclease RecJ, C-terminal domain, deinococcusDomain
IPR041122RecJ, OB domainDomain
IPR051673Single-stranded-DNA-specific exonuclease RecJFamily