6LLF | pdb_00006llf

Biphenyl-2,2',3-triol-soaked resting complex of Oxy and Fd in carbazole 1,9a-dioxygenase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6llfc1	All beta proteins	ISP domain	ISP domain	automated matches	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
C	d6llfc2	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	Ring hydroxylating alpha subunit catalytic domain	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
C	d6llfc3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
B	d6llfb1	All beta proteins	ISP domain	ISP domain	automated matches	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
B	d6llfb2	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	Ring hydroxylating alpha subunit catalytic domain	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
B	d6llfb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
A	d6llfa1	All beta proteins	ISP domain	ISP domain	automated matches	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
A	d6llfa2	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	Ring hydroxylating alpha subunit catalytic domain	automated matches	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)
A	d6llfa3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Janthinobacterium sp. J3 ) [TaxId: 213804 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	ISP domain	8080536	3000233	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	ISP domain	8080536	3000233	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ISP domain	8080536	3000233	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ISP domain	8039674	3000233	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bet v1-like	8039675	3000738	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ISP domain	8039674	3000233	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bet v1-like	8039675	3000738	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Bet v1-like	8039675	3000738	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ISP domain	8039674	3000233	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Epimerase	e6llfF2	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)
E	Epimerase	e6llfE2	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)
D	Epimerase	e6llfD1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)
C	Epimerase	e6llfC1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)
B	Epimerase	e6llfB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)
A	Epimerase	e6llfA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Epimerase	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, E, F	Ferredoxin CarAc	oxidoreductase activity oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor oxidoreductase activity, acting on hydrogen as donor ferredoxin hydrogenase activity catalytic activity dioxygenase activity iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	cellular response to stimulus catabolic process response to stimulus cellular response to xenobiotic stimulus carbazole catabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus cellular response to chemical stimulus response to chemical metabolic process cellular process	-
A, B, C	Terminal oxygenase component of carbazole	oxidoreductase activity catalytic activity iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D, E, F	IPR017941	Rieske [2Fe-2S] iron-sulphur domain	Domain
D, E, F	IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	Homologous Superfamily
A, B, C	IPR017941	Rieske [2Fe-2S] iron-sulphur domain	Domain
A, B, C	IPR050584	Cholesterol 7-desaturase	Family
A, B, C	IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	Homologous Superfamily
A, B, C	IPR021028	Homotrimeric ring hydroxylase, catalytic domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.