6LAT | pdb_00006lat

The cryo-EM structure of HEV VLP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNorovirus P2 domain-like 8093125 3002678 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASP2_2nde6latA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Phage tail proteinsF: SP2_2ndECOD (1.6)
ASP2_3rde6latA2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Phage tail proteinsF: SP2_3rdECOD (1.6)
ASP2_1ste6latA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: SP2_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
A2.40.30.190 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (utative)