Crystal structure of Arabidopsis cytidine deaminase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Anticodon_3 | e6l08B1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: Anticodon_3 | ECOD (v294.1) |
| A | Fungal_lectin | e6l08A1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Fungal_lectin | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (utative) |
| A | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF08211 | Cytidine and deoxycytidylate deaminase zinc-binding region (dCMP_cyt_deam_2) | Cytidine and deoxycytidylate deaminase zinc-binding region | - | Family | |
| PF00383 | Cytidine and deoxycytidylate deaminase zinc-binding region (dCMP_cyt_deam_1) | Cytidine and deoxycytidylate deaminase zinc-binding region | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050202 | Cytidine and Deoxycytidylate Deaminase | Family | |
| IPR006263 | Cytidine deaminase, homodimeric | Family | |
| IPR002125 | Cytidine and deoxycytidylate deaminase domain | Domain | |
| IPR016192 | APOBEC/CMP deaminase, zinc-binding | Binding Site | |
| IPR013171 | Cytidine/deoxycytidylate deaminase, zinc-binding domain | Domain | |
| IPR016193 | Cytidine deaminase-like | Homologous Superfamily |














