6KFV | pdb_00006kfv

GroEL from Xanthomonas oryzae pv. oryzae


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NIon_transe6kfvN1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
MIon_transe6kfvM1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
LIon_transe6kfvL1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
KIon_transe6kfvK1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
JIon_transe6kfvJ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
IIon_transe6kfvI1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
HIon_transe6kfvH1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
GIon_transe6kfvG1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
FIon_transe6kfvF1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
EIon_transe6kfvE1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
DIon_transe6kfvD1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
CIon_transe6kfvC1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
BIon_transe6kfvB1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)
AIon_transe6kfvA1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Ion_transECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
N1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
N3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
M1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
M3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
L1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
L3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
K1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
K3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
J1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
J3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
I1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
I3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR018370Chaperonin Cpn60, conserved siteConserved Site
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001844Chaperonin Cpn60/GroELFamily
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily