Structure of RNase J1 from Staphylococcus epidermidis
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Lactamase_B_6_1 | e6k6sB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_6_1 | ECOD (1.6) |
| B | MG423 | e6k6sB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MG423 | ECOD (1.6) |
| A | Lactamase_B_6_1 | e6k6sA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_6_1 | ECOD (1.6) |
| A | MG423 | e6k6sA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MG423 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001279 | Metallo-beta-lactamase | Domain | |
| IPR001587 | Ribonuclease J, conserved site | Conserved Site | |
| IPR055132 | Ribonuclease J, beta-CASP domain | Domain | |
| IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain | Domain | |
| IPR004613 | Ribonuclease J | Family | |
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
| IPR030854 | Ribonuclease J, bacteria | Family | |
| IPR041636 | Ribonuclease J, C-terminal | Domain | |
| IPR042173 | Ribonuclease J, domain 2 | Homologous Superfamily |














