6K43 | pdb_00006k43

Cryo-EM structure of Holo-bacterioferritin-form-I from Streptomyces coelicolor

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
E [auth F]	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	Ferritin	e6k43X1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
W	Ferritin	e6k43W1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
V	Ferritin	e6k43V1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
U	Ferritin	e6k43U1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
T	Ferritin	e6k43T1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
S	Ferritin	e6k43S1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
R	Ferritin	e6k43R1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
Q	Ferritin	e6k43Q1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
P	Ferritin	e6k43P1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
O	Ferritin	e6k43O1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
N	Ferritin	e6k43N1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
M	Ferritin	e6k43M1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
L	Ferritin	e6k43L1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
K	Ferritin	e6k43K1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
J	Ferritin	e6k43J1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
I	Ferritin	e6k43I1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
H	Ferritin	e6k43H1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
G	Ferritin	e6k43G1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
F [auth E]	Ferritin	e6k43E1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
E [auth F]	Ferritin	e6k43F1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
D	Ferritin	e6k43D1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
C	Ferritin	e6k43C1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
B	Ferritin	e6k43B1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
A	Ferritin	e6k43A1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	Bacterioferritin	cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding tetrapyrrole binding heme binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding tetrapyrrole binding heme binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR002024	Bacterioferritin	Family
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR008331	Ferritin/DPS domain	Domain