6K0L | pdb_00006k0l

The crystal structure of simian CD163 SRCR5

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d6k0lb1	Alpha and beta proteins (a+b)	SRCR-like	SRCR-like	automated matches	automated matches	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)
B	d6k0lb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)
B	d6k0lb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)
A	d6k0la1	Alpha and beta proteins (a+b)	SRCR-like	SRCR-like	automated matches	automated matches	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)
A	d6k0la3	Artifacts	Tags	Tags	Tags	C-terminal Tags	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)
A	d6k0la2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Green monkey (Chlorocebus aethiops ) [TaxId: 9534 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Scavenger receptor cysteine-rich (SRCR) domain	8095726	4002525	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	SRCR-like	8095727	3001377	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	SRCR-like	8095727	3001377	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	C1-set	e6k0lB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: C1-set	ECOD (v294.1)
A	C1-set	e6k0lA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: C1-set	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.10.250.10	Alpha Beta	Roll	Mac-2 Binding Protein	SRCR-like domain	CATH (utative)
A	3.10.250.10	Alpha Beta	Roll	Mac-2 Binding Protein	SRCR-like domain	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Scavenger receptor cysteine-rich type 1 protein M130	-	acute-phase response response to stimulus defense response response to stress inflammatory response acute inflammatory response	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036772	SRCR-like domain superfamily	Homologous Superfamily
A, B	IPR001190	SRCR domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.