6JW4 | pdb_00006jw4

Degenerate RVD RG forms a distinct loop conformation

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATAL_effectore6jw4A1 A: alpha superhelicesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE) (From Topology)T: Transcription activator-like effector (TALE)F: TAL_effectorECOD (1.6)
D [auth B]TAL_effectore6jw4B1 A: alpha superhelicesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE) (From Topology)T: Transcription activator-like effector (TALE)F: TAL_effectorECOD (1.6)
G [auth E]TAL_effectore6jw4E1 A: alpha superhelicesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE) (From Topology)T: Transcription activator-like effector (TALE)F: TAL_effectorECOD (1.6)
J [auth H]TAL_effectore6jw4H1 A: alpha superhelicesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE) (From Topology)T: Transcription activator-like effector (TALE)F: TAL_effectorECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
G [auth E],
J [auth H]		PF03377TAL effector repeat (TAL_effector)TAL effector repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B],
G [auth E],
J [auth H]		TAL effector- -
B [auth I],
E [auth C],
H [auth F],
K		DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3')---
C [auth J],
F [auth D],
I [auth G],
L		DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B],
G [auth E],
J [auth H]		IPR053450Transcription activator-like effector proteinFamily
A,
D [auth B],
G [auth E],
J [auth H]		IPR005042TAL effector repeatRepeat