Structure of the green algal photosystem I supercomplex with light-harvesting complex I
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth J] | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8094723 | 3000824 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8094180 | 3000813 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Electron transport accessory proteins | 8094773 | 3000325 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Photosystem I subunit PsaD | 8095071 | 3000951 | SCOP2B (2022-06-29) |
| C | SCOP2 Family | 7-Fe ferredoxin | 8093859 | 4001227 | SCOP2 (2022-06-29) |
| C | SCOP2 Superfamily | 4Fe-4S ferredoxins | 8093860 | 3000020 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094499 | 3000850 | SCOP2B (2022-06-29) |
| S [auth 6] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099928 | 3000343 | SCOP2B (2022-06-29) |
| R [auth 5] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099932 | 3000343 | SCOP2B (2022-06-29) |
| Q [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099934 | 3000343 | SCOP2B (2022-06-29) |
| O [auth 8] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099930 | 3000343 | SCOP2B (2022-06-29) |
| N [auth 7] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100068 | 3000343 | SCOP2B (2022-06-29) |
| P [auth Z] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| L [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| K [auth L] | SCOP2 Family | Photosystem I reaction center subunit XI, PsaL | 8097189 | 4002135 | SCOP2 (2022-06-29) |
| K [auth L] | SCOP2 Superfamily | Photosystem I reaction center subunit XI, PsaL | 8097190 | 3000870 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094461 | 3000850 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth J] | e6jo6J1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| H [auth I] | e6jo6I1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| G | e6jo6G1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| F | e6jo6F1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| E | e6jo6E1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| D | e6jo6D1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| C | e6jo6C1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| B | e6jo6B1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| S [auth 6] | e6jo661 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: AAA_lid_3 | F: | ECOD (20:10:01) | |
| R [auth 5] | e6jo651 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: AAA_lid_3 | F: | ECOD (20:10:01) | |
| Q [auth 4] | e6jo641 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| O [auth 8] | e6jo681 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| N [auth 7] | e6jo671 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| M [auth 3] | e6jo631 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| P [auth Z] | e6jo6Z1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| L [auth 1] | e6jo611 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| K [auth L] | e6jo6L1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| J [auth K] | e6jo6K1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) | |
| A | e6jo6A1 | A: P-loop domains-like | X: P-loop domains-related | H: P-loop containing nucleoside triphosphate hydrolases | T: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth J] | PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family |
| H [auth I] | PF00796 | Photosystem I reaction centre subunit VIII (PSI_8) | Photosystem I reaction centre subunit VIII | - | Family |
| PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain | |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family | |
| S [auth 6] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| R [auth 5] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| Q [auth 4] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| O [auth 8] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| N [auth 7] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| L [auth 1], P [auth Z] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystem+Light-Harvesting Complex Supercomplex | Photosystem I supercomplex with 10 light-harvesting complexes I |














