Structure of the green algal photosystem I supercomplex with light-harvesting complex I
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Photosystem I subunit PsaD | 8095071 | 3000951 | SCOP2B (2022-06-29) |
| F | SCOP2 Family | Subunit III of photosystem I reaction centre, PsaF | 8094179 | 4002091 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8094180 | 3000813 | SCOP2 (2022-06-29) |
| O [auth 8] | SCOP2 Family | Chlorophyll a-b binding protein | 8099929 | 4001763 | SCOP2 (2022-06-29) |
| O [auth 8] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8099930 | 3000343 | SCOP2 (2022-06-29) |
| S [auth 6] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099928 | 3000343 | SCOP2B (2022-06-29) |
| I [auth J] | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8094723 | 3000824 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Electron transport accessory proteins | 8094773 | 3000325 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8093860 | 3000020 | SCOP2B (2022-06-29) |
| U [auth 9] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8097194 | 3000343 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094499 | 3000850 | SCOP2B (2022-06-29) |
| R [auth 5] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099932 | 3000343 | SCOP2B (2022-06-29) |
| Q [auth 4] | SCOP2 Family | Chlorophyll a-b binding protein | 8099933 | 4001763 | SCOP2 (2022-06-29) |
| Q [auth 4] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8099934 | 3000343 | SCOP2 (2022-06-29) |
| N [auth 7] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100068 | 3000343 | SCOP2B (2022-06-29) |
| P [auth Z] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| L [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| K [auth L] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8097190 | 3000870 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094461 | 3000850 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5D1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| F | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5F1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| J [auth K] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5K1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| O [auth 8] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo581 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| S [auth 6] | AAA_lid_3 | e6jo561 | A: alpha bundles | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: AAA_lid_3 | ECOD (develop294) |
| T [auth 2] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo521 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| I [auth J] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5J1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| H [auth I] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5I1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| G | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5G1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| E | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5E1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| C | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5C1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| U [auth 9] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo591 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| B | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5B1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| R [auth 5] | AAA_lid_3 | e6jo551 | A: alpha bundles | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: AAA_lid_3 | ECOD (develop294) |
| Q [auth 4] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo541 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| N [auth 7] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo571 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| M [auth 3] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo531 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| P [auth Z] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5Z1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| L [auth 1] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo511 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| K [auth L] | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5L1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
| A | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | e6jo5A1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| O [auth 8] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| S [auth 6] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| T [auth 2] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| I [auth J] | PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family |
| H [auth I] | PF00796 | Photosystem I reaction centre subunit VIII (PSI_8) | Photosystem I reaction centre subunit VIII | - | Family |
| PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain | |
| U [auth 9] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family | |
| R [auth 5] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| Q [auth 4] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| N [auth 7] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| L [auth 1], P [auth Z] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Photosystem I |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystem+Light-Harvesting Complex Supercomplex | Photosystem I supercomplex with 10 light-harvesting complexes I |














