6JLU | pdb_00006jlu

Structure of PSII-FCP supercomplex from a centric diatom Chaetoceros gracilis at 3.02 angstrom resolution


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8094731 3001547 SCOP2B (2022-06-29)
GA [auth h]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8094731 3001547 SCOP2B (2022-06-29)
U [auth V]SCOP2B SuperfamilyCytochrome c 8094925 3000815 SCOP2B (2022-06-29)
TA [auth v]SCOP2 FamilyMonodomain cytochrome c 8094924 4000635 SCOP2 (2022-06-29)
TA [auth v]SCOP2 SuperfamilyCytochrome c 8094925 3000815 SCOP2 (2022-06-29)
T [auth U]SCOP2B SuperfamilyPsbU/PolX domain-like 8094223 3000893 SCOP2B (2022-06-29)
SA [auth u]SCOP2B SuperfamilyPsbU/PolX domain-like 8094223 3000893 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyOMPA barrel-like 8095677 3000208 SCOP2B (2022-06-29)
NA [auth o]SCOP2 FamilyPsbO-like 8095676 4002770 SCOP2 (2022-06-29)
NA [auth o]SCOP2 SuperfamilyOMPA barrel-like 8095677 3000208 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ie6jluI1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
HA [auth i]e6jlui1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
He6jluH1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
GA [auth h]e6jluh1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Ge6jluG1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
FA [auth g]e6jlug1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Fe6jluF1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
EA [auth f]e6jluf1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Ee6jluE1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
DA [auth e]e6jlue1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
De6jluD1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
CA [auth d]e6jlud1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Ce6jluC1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
BA [auth c]e6jluc1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
RB [auth 19]e6jlu191 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
HB [auth 9]e6jlu91 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
ZA [auth 1]e6jlu11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
QB [auth 18]e6jlu181 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
PB [auth 17]e6jlu171 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
OB [auth 16]e6jlu161 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
NB [auth 15]e6jlu151 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
MB [auth 14]e6jlu141 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
LB [auth 13]e6jlu131 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
KB [auth 12]e6jlu121 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
JB [auth 11]e6jlu111 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
GB [auth 8]e6jlu81 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
FB [auth 7]e6jlu71 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
EB [auth 6]e6jlu61 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
DB [auth 5]e6jlu51 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
CB [auth 4]e6jlu41 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
BB [auth 3]e6jlu31 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
AB [auth 2]e6jlu21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
YA [auth 0]e6jlu01 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
IB [auth 10]e6jlu101 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Y [auth Z]e6jluZ1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
XA [auth z]e6jluz1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
X [auth Y]e6jluY1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
WA [auth y]e6jluy1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
W [auth X]e6jluX1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
VA [auth x]e6jlux1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
V [auth W]e6jluW01 A: Rossmann-likeX: Rossmann-relatedH: FAD/NAD(P)-binding domainT: CatAgl_D1F:ECOD (20:10:01)
U [auth V]e6jluV1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
TA [auth v]e6jluv1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
T [auth U]e6jluU1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
SA [auth u]e6jluu1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Be6jluB1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
AA [auth b]e6jlub1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
S [auth T]e6jluT1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
RA [auth t]e6jlut1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Qe6jluQ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Pico_P1AF:ECOD (20:10:01)
PA [auth q]e6jluq1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Pico_P1AF:ECOD (20:10:01)
Pe6jluP1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
OA [auth p]e6jlup1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Oe6jluO1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
NA [auth o]e6jluo1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Me6jluM1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
LA [auth m]e6jlum1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Le6jluL1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
KA [auth l]e6jlul1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Ke6jluK1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
JA [auth k]e6jluk1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Je6jluJ1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
IA [auth j]e6jluj1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Z [auth a]e6jlua1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)
Ae6jluA1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: LysF:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
HA [auth i],
I
PsbI---
GA [auth h],
H
Photosystem II reaction center protein H
FA [auth g],
G
Psb31---
EA [auth f],
F
PsbF---
DA [auth e],
E
PsbE---
CA [auth d],
D
PsbD---
BA [auth c],
C
PsbC---
HB [auth 9],
RB [auth 19]
FCP-F---
FCP-A---
IB [auth 10],
YA [auth 0]
FCP-E---
XA [auth z],
Y [auth Z]
PsbZ---
WA [auth y],
X [auth Y]
PsbY---
VA [auth x],
W [auth X]
Photosystem II reaction center X protein-
UA [auth w],
V [auth W]
PsbW---
TA [auth v],
U [auth V]
Cytochrome c-550
SA [auth u],
T [auth U]
Extrinsic protein in photosystem II-
AA [auth b],
B
PsbB---
RA [auth t],
S [auth T]
PsbT---
QA [auth r],
R
PsbG---
PA [auth q],
Q
Extrinsic protein in photosystem II- - -
OA [auth p],
P
FCP-D---
NA [auth o],
O
Extrinsic protein in photosystem II-
MA [auth n],
N
Psb34---
LA [auth m],
M
PsbM---
KA [auth l],
L
PsbL---
JA [auth k],
K
PsbK---
IA [auth j],
J
PsbJ---
A,
Z [auth a]
PsbA---