Seleno-methionine PNGM-1 from deep-sea sediment metagenome
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| H | NUDIX | e6jkwH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| G | NUDIX | e6jkwG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| F | NUDIX | e6jkwF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| E | NUDIX | e6jkwE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| D | NUDIX | e6jkwD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| C | NUDIX | e6jkwC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| B | NUDIX | e6jkwB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
| A | NUDIX | e6jkwA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: a+b domain in acetyl-CoA synthetase-like proteins | T: a+b domain in acetyl-CoA synthetase-like proteins | F: NUDIX | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| H | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| G | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| F | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| E | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| D | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| C | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| B | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
| A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (utative) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3004571 | PNGM-1 | PNGM-1 is a subclass B3 metallo-beta-lactamase first identified from a deep-sea sediment meta-genome. PNGM-1 is shown to reduce susceptibility to extended- and broad-spectrum cephalosporins, carbapenems, and penicillins. PNGM-1 is a novel metallo-beta-lactamase which predates the current antibiotic era. | CARD (4.0.1) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:3004570 | PNGM beta-lactamase | carbapenem, cephalosporin, penicillin beta-lactam | antibiotic inactivation | CARD (4.0.1) |














