Annotations: 6JJJ

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6jjja_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B	d6jjjb_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d6jjjc_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d6jjjd_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
E	d6jjje_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
F	d6jjjf_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	C-type lectin-like	8098922	3001261	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	C-type lectin-like	8098922	3001261	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	C-type lectin-like	8098922	3001261	SCOP2B (2022-06-29)
D	SCOP2 Family	C-type lectin domain	8098921	4002453	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	C-type lectin-like	8098922	3001261	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	C-type lectin-like	8098922	3001261	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	C-type lectin-like	8098922	3001261	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lectin_C	e6jjjA1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)
B	Lectin_C	e6jjjB1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)
C	Lectin_C	e6jjjC1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)
D	Lectin_C	e6jjjD1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)
E	Lectin_C	e6jjjE1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)
F	Lectin_C	e6jjjF1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)
B	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)
C	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)
D	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)
E	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)
F	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00059	Lectin C-type domain (Lectin_C)	Lectin C-type domain	This family includes both long and short form C-type	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	C-type lectin domain family 4 member F	binding carbohydrate binding galactose binding monosaccharide binding small molecule binding lipid binding glycolipid binding carbohydrate derivative binding	multicellular organismal process T cell activation immune system process cell activation alpha-beta T cell activation cellular process lymphocyte activation NK T cell activation leukocyte activation localization import into cell transport endocytosis establishment of localization multicellular organismal process T cell activation immune system process cell activation alpha-beta T cell activation cellular process lymphocyte activation NK T cell activation leukocyte activation localization import into cell transport endocytosis establishment of localization vesicle-mediated transport	cell periphery plasma membrane membrane cellular anatomical entity cell surface external side of plasma membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR001304	C-type lectin-like	Domain
A, B, C, D, E A, B, C, D, E, F	IPR018378	C-type lectin, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR016187	C-type lectin fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR033989	CD209-like, C-type lectin-like domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.