K4U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d6jfnb_ | Alpha and beta proteins (a+b) | Peptide deformylase | Peptide deformylase | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
| A | d6jfna_ | Alpha and beta proteins (a+b) | Peptide deformylase | Peptide deformylase | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Peptide deformylase | 8095285 | 3001229 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Peptide deformylase | 8095284 | 4002432 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Peptide deformylase | 8095285 | 3001229 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Pico_P1A | e6jfnB1 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: Pico_P1A | ECOD (v294.1) |
| A | MacB_PCD | e6jfnA1 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: MacB_PCD | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.90.45.10 | Alpha Beta | Alpha-Beta Complex | Peptide Deformylase | Peptide deformylase | CATH (utative) |
| A | 3.90.45.10 | Alpha Beta | Alpha-Beta Complex | Peptide Deformylase | Peptide deformylase | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Peptide deformylase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR023635 | Peptide deformylase | Family | |
| IPR036821 | Peptide deformylase superfamily | Homologous Superfamily |














