6J7M
Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF10093 | e6j7mA2 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: PF10093 | ECOD (1.6) |
B [auth C] | PF10093 | e6j7mC1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: PF10093 | ECOD (1.6) |
C [auth M] | PF01132 | e6j7mM1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF01132 | ECOD (1.6) |
C [auth M] | PF09285 | e6j7mM3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF09285 | ECOD (1.6) |
C [auth M] | PF08207 | e6j7mM2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF08207 | ECOD (1.6) |
D [auth N] | PF01132 | e6j7mN1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF01132 | ECOD (1.6) |
D [auth N] | PF09285 | e6j7mN2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF09285 | ECOD (1.6) |
D [auth N] | PF08207 | e6j7mN3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF08207 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF10093 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP (EarP) | Elongation-Factor P (EF-P) rhamnosyltransferase EarP | - | Family |
C [auth M], D [auth N] | PF09285 | Elongation factor P, C-terminal (Elong-fact-P_C) | Elongation factor P, C-terminal | Members of this family of nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology [1]. | Domain |
C [auth M], D [auth N] | PF01132 | Elongation factor P (EF-P) OB domain (EFP) | Elongation factor P (EF-P) OB domain | - | Domain |
C [auth M], D [auth N] | PF08207 | Elongation factor P (EF-P) KOW-like domain (EFP_N) | Elongation factor P (EF-P) KOW-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | Earp | - | - | |
C [auth M], D [auth N] | Elongation factor P | - |