6J54 | pdb_00006j54

Cryo-EM structure of the mammalian E-state ATP synthase FO section


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth a]ATP-synt_Ae6j54a1 A: alpha bundlesX: F1F0 ATP synthase subunit A (From Topology)H: F1F0 ATP synthase subunit A (From Topology)T: F1F0 ATP synthase subunit AF: ATP-synt_AECOD (1.6)
Q [auth R]ATP-synt_Ce6j54R1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
P [auth Q]ATP-synt_Ce6j54Q1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
O [auth P]ATP-synt_Ce6j54P1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
N [auth O]ATP-synt_Ce6j54O1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
M [auth N]ATP-synt_Ce6j54N1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
L [auth M]ATP-synt_Ce6j54M1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
K [auth L]ATP-synt_Ce6j54L1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
J [auth K]ATP-synt_Ce6j54K1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth 8]PF00895ATP synthase protein 8 (ATP-synt_8)ATP synthase protein 8- Family
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth f]ATP synthase subunit f, mitochondrial-
I [auth a]ATP synthase subunit a
H [auth 8]ATP synthase protein 8
G [auth k]subunit k analog---
F [auth i]ATP synthase membrane subunit DAPIT- -
E [auth g]ATP synthase subunit g, mitochondrial---
C [auth e]ATP synthase subunit e, mitochondrial---
B [auth d]ATP synthase subunit d, mitochondrial
R [auth u]ATP synthase membrane subunit 6.8PL---
Mitochondrial H+ transporting ATP synthase subunit c isoform 1
A [auth b]ATP synthase peripheral stalk-membrane subunit b

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth f]IPR019344Mitochondrial F1-F0 ATP synthase subunit F, predictedFamily
I [auth a]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
I [auth a]IPR000568ATP synthase, F0 complex, subunit AFamily
I [auth a]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
I [auth a]IPR045083ATP synthase, F0 complex, subunit A, bacterial/mitochondriaFamily
H [auth 8]IPR039017ATP synthase protein 8, mammalsFamily
H [auth 8]IPR001421ATP synthase protein 8, metazoaFamily
F [auth i]IPR009125ATP synthase membrane subunit KFamily
B [auth d]IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialHomologous Superfamily
B [auth d]IPR008689ATP synthase, F0 complex, subunit D, mitochondrialFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
A [auth b]IPR008688ATP synthase, F0 complex, subunit B/MI25Family
A [auth b]IPR013837ATP synthase, F0 complex, subunit BFamily