6J54 | pdb_00006j54

Cryo-EM structure of the mammalian E-state ATP synthase FO section


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth b]SATe6j54b01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SATECOD (v294.2)
I [auth a]7tm_1e6j54a1 A: beta barrelsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: 7tm_1ECOD (v294.2)
J [auth K]TetR_Ne6j54K1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
K [auth L]TetR_Ne6j54L1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
L [auth M]TetR_Ne6j54M1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
M [auth N]TetR_Ne6j54N1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
N [auth O]TetR_Ne6j54O1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
O [auth P]TetR_Ne6j54P1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
P [auth Q]TetR_Ne6j54Q1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)
Q [auth R]TetR_Ne6j54R1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth 8]PF00895ATP synthase protein 8 (ATP-synt_8)ATP synthase protein 8- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth b]ATP synthase peripheral stalk-membrane subunit b
B [auth d]ATP synthase subunit d, mitochondrial
C [auth e]ATP synthase subunit e, mitochondrial---
D [auth f]ATP synthase subunit f, mitochondrial-
E [auth g]ATP synthase subunit g, mitochondrial---
F [auth i]ATP synthase membrane subunit DAPIT- -
G [auth k]subunit k analog---
H [auth 8]ATP synthase protein 8
I [auth a]ATP synthase subunit a
Mitochondrial H+ transporting ATP synthase subunit c isoform 1
R [auth u]ATP synthase membrane subunit 6.8PL---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth b]IPR008688ATP synthase, F0 complex, subunit B/MI25Family
A [auth b]IPR013837ATP synthase, F0 complex, subunit BFamily
B [auth d]IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialHomologous Superfamily
B [auth d]IPR008689ATP synthase, F0 complex, subunit D, mitochondrialFamily
D [auth f]IPR019344Mitochondrial F1-F0 ATP synthase subunit F, predictedFamily
F [auth i]IPR009125ATP synthase membrane subunit KFamily
H [auth 8]IPR039017ATP synthase protein 8, mammalsFamily
H [auth 8]IPR001421ATP synthase protein 8, metazoaFamily
I [auth a]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
I [auth a]IPR000568ATP synthase, F0 complex, subunit AFamily
I [auth a]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
I [auth a]IPR045083ATP synthase, F0 complex, subunit A, bacterial/mitochondriaFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain