Annotations: 6J0Y

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e6j0yA3	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF00533	e6j0yA2	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: PF00533	ECOD (1.6)
A	PF12738	e6j0yA1	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: PF12738	ECOD (1.6)
C [auth B]	F_UNCLASSIFIED	e6j0yB2	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: F_UNCLASSIFIED	ECOD (1.6)
C [auth B]	PF00533	e6j0yB1	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: PF00533	ECOD (1.6)
C [auth B]	PF12738	e6j0yB3	A: a/b three-layered sandwiches	X: BRCT domain (From Topology)	H: BRCT domain (From Topology)	T: BRCT domain	F: PF12738	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B]	PF00533	BRCA1 C Terminus (BRCT) domain (BRCT)	BRCA1 C Terminus (BRCT) domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C [auth B]	Regulator of Ty1 transposition protein 107	-	protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization localization protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization localization DNA double-strand break attachment to nuclear envelope chromosome localization organelle localization chromosome attachment to the nuclear envelope cell cycle cell cycle process cellular response to stimulus double-strand break repair response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair DNA double-strand break processing regulation of primary metabolic process regulation of nucleobase-containing compound metabolic process regulation of biological process biological regulation regulation of DNA double-strand break processing regulation of macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process DNA damage checkpoint signaling regulation of cellular process regulation of cell cycle phase transition signaling negative regulation of biological process regulation of cellular response to stress negative regulation of cell cycle cell cycle phase transition regulation of signal transduction intracellular signal transduction cell communication regulation of cell cycle checkpoint regulation of intracellular signal transduction regulation of response to stress negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction regulation of cell cycle regulation of signaling regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling regulation of response to stimulus signal transduction in response to DNA damage regulation of cell communication regulation of DNA damage checkpoint retrotransposon silencing transposition retrotransposition	cell periphery cellular anatomical entity Cul8-RING ubiquitin ligase complex cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus cell periphery cellular anatomical entity Cul8-RING ubiquitin ligase complex cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
B [auth C], D	Peptide from Structure-specific endonuclease subunit SLX4	5'-flap endonuclease activity endonuclease activity catalytic activity, acting on a nucleic acid endodeoxyribonuclease activity, producing 5'-phosphomonoesters hydrolase activity DNA nuclease activity DNA endonuclease activity nuclease activity hydrolase activity, acting on ester bonds catalytic activity, acting on DNA flap endonuclease activity endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters catalytic activity	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA replication organic substance metabolic process metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA replication organic substance metabolic process metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process regulation of cellular process sexual reproduction homologous recombination regulation of reproductive process reproductive process meiotic DNA double-strand break formation involved in reciprocal meiotic recombination meiotic cell cycle process regulation of primary metabolic process cellular component organization regulation of meiotic DNA double-strand break formation meiosis I meiotic nuclear division regulation of nucleobase-containing compound metabolic process cell cycle cellular component organization or biogenesis regulation of cell cycle reciprocal homologous recombination regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination cell cycle process regulation of biological process regulation of cell cycle process meiotic cell cycle DNA recombination organelle fission biological regulation regulation of macromolecule metabolic process meiotic DNA double-strand break formation reciprocal meiotic recombination nuclear division organelle organization meiosis I cell cycle process regulation of metabolic process regulation of DNA metabolic process DNA double-strand break processing DNA repair double-strand break repair regulation of DNA double-strand break processing regulation of cellular component organization DNA-templated DNA replication maintenance of fidelity negative regulation of biological process maintenance of DNA repeat elements negative regulation of DNA-templated DNA replication regulation of replication fork arrest at rDNA repeats negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process replication fork arrest at rDNA repeats DNA-templated DNA replication negative regulation of DNA replication negative regulation of metabolic process chromosome organization regulation of chromosome organization regulation of organelle organization maintenance of rDNA regulation of DNA-templated DNA replication replication fork arrest negative regulation of DNA metabolic process regulation of DNA replication interstrand cross-link repair double-strand break repair via single-strand annealing double-strand break repair via single-strand annealing, removal of nonhomologous ends removal of nonhomologous ends DNA damage checkpoint signaling regulation of cell cycle phase transition signaling regulation of cellular response to stress negative regulation of cell cycle cell cycle phase transition regulation of signal transduction intracellular signal transduction cell communication regulation of cell cycle checkpoint regulation of intracellular signal transduction regulation of response to stress negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction regulation of signaling DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling regulation of response to stimulus signal transduction in response to DNA damage regulation of cell communication regulation of DNA damage checkpoint double-strand break repair via break-induced replication recombinational repair double-strand break repair via homologous recombination	protein-containing complex catalytic complex intracellular protein-containing complex endonuclease complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome chromosome intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle lumen intracellular organelle protein-containing complex catalytic complex intracellular protein-containing complex endonuclease complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome chromosome intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle nuclear protein-containing complex Slx1-Slx4 complex cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B]	IPR001357	BRCT domain	Domain
A, C [auth B]	IPR036420	BRCT domain superfamily	Homologous Superfamily
A, C [auth B]	IPR031906	Regulator of Ty1 transposition protein 107, BRCT domain	Domain
B [auth C], D	IPR027784	Structure-specific endonuclease subunit Slx4, ascomycetes	Family
B [auth C], D	IPR018574	Structure-specific endonuclease subunit Slx4	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.