Annotations: 6IYC

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF05450	e6iycA3	A: a/b three-layered sandwiches	X: Phosphorylase/hydrolase-like	H: Zn-dependent exopeptidases (From Topology)	T: Zn-dependent exopeptidases	F: PF05450	ECOD (1.6)
A	PF18266	e6iycA2	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: PF18266	ECOD (1.6)
A	F_UNCLASSIFIED	e6iycA1	A: extended segments	X: Nicastrin transmembrane helix (From Topology)	H: Nicastrin transmembrane helix (From Topology)	T: Nicastrin transmembrane helix	F: F_UNCLASSIFIED	ECOD (1.6)
B	PF01080	e6iycB1	A: alpha arrays	X: Presenilin family intramembrane aspartate proteases (From Topology)	H: Presenilin family intramembrane aspartate proteases (From Topology)	T: Presenilin family intramembrane aspartate proteases	F: PF01080	ECOD (1.6)
C	PF06105	e6iycC1	A: alpha bundles	X: Intramembrane protease Rce1-related (From Topology)	H: Intramembrane protease Rce1-related (From Topology)	T: Intramembrane protease Rce1-related	F: PF06105	ECOD (1.6)
D	PF10251	e6iycD1	A: alpha bundles	X: Spectrin repeat-like	H: Gamma-secretase subunit PEN-2 (From Topology)	T: Gamma-secretase subunit PEN-2	F: PF10251	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF18266	Nicastrin small lobe (Ncstrn_small)	Nicastrin small lobe	This domain is part of the protein Nicastrin, a component of gamma secretase present in Homo sapiens. Gamma-secretase is thought to contribute to Alzheimer's disease development by generating beta-amyloid peptides. This domain is the known as the sma ...	This domain is part of the protein Nicastrin, a component of gamma secretase present in Homo sapiens. Gamma-secretase is thought to contribute to Alzheimer's disease development by generating beta-amyloid peptides. This domain is the known as the small lobe which forms the 'lid'. The lid is an extended surface loop that covers the hydrophilic pocket that is thought to be responsible for substrate recruitment. On substrate binding, the large lobe is thought to rotate relative to the small lobe [1].	Domain
A	PF05450	Nicastrin (Nicastrin)	Nicastrin	-	Family
B	PF01080	Presenilin (Presenilin)	Presenilin	-	Family
C	PF06105	Aph-1 protein (Aph-1)	Aph-1 protein	-	Family
D	PF10251	Presenilin enhancer-2 subunit of gamma secretase (PEN-2)	Presenilin enhancer-2 subunit of gamma secretase	-	Family
E	PF03494	Beta-amyloid peptide (beta-APP) (Beta-APP)	Beta-amyloid peptide (beta-APP)	-	Family
E	PF10515	Beta-amyloid precursor protein C-terminus (APP_amyloid)	Beta-amyloid precursor protein C-terminus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nicastrin	aspartic-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity aspartic endopeptidase activity, intramembrane cleaving aspartic-type endopeptidase activity catalytic activity endopeptidase activity protein-macromolecule adaptor activity molecular adaptor activity ATPase binding protein binding binding enzyme binding aspartic-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity aspartic endopeptidase activity, intramembrane cleaving aspartic-type endopeptidase activity catalytic activity endopeptidase activity protein-macromolecule adaptor activity molecular adaptor activity ATPase binding protein binding binding enzyme binding signaling receptor binding growth factor receptor binding	positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling biological regulation cell-cell signaling positive regulation of synaptic transmission chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of long-term synaptic potentiation regulation of cell communication cellular process positive regulation of signaling cellular response to stimulus cell surface receptor signaling pathway response to stimulus glutamate receptor signaling pathway signal transduction developmental process multicellular organismal process head development animal organ development brain development nervous system development multicellular organism development cerebellum development central nervous system development metencephalon development anatomical structure development hindbrain development system development cellular response to inorganic substance cellular response to metal ion response to inorganic substance cellular response to chemical stimulus response to metal ion response to chemical cellular response to calcium ion response to calcium ion cell population proliferation cell activation lymphocyte activation leukocyte proliferation leukocyte activation immune system process mononuclear cell proliferation T cell activation lymphocyte proliferation T cell proliferation amyloid precursor protein catabolic process organic substance metabolic process organonitrogen compound metabolic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process amyloid precursor protein metabolic process short-term synaptic potentiation Notch signaling pathway cellular response to nitrogen compound response to dopamine response to organic substance dopamine receptor signaling pathway cellular response to dopamine response to monoamine cellular response to endogenous stimulus response to catecholamine cellular response to catecholamine stimulus cellular response to organic substance response to organic cyclic compound response to organonitrogen compound response to endogenous stimulus cellular response to organic cyclic compound response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to organonitrogen compound cellular response to monoamine stimulus positive regulation of glycoprotein metabolic process positive regulation of protein metabolic process cellular biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process positive regulation of amyloid precursor protein biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process amyloid precursor protein biosynthetic process organic substance biosynthetic process positive regulation of macromolecule metabolic process regulation of amyloid precursor protein biosynthetic process regulation of glycoprotein biosynthetic process positive regulation of glycoprotein biosynthetic process carbohydrate derivative biosynthetic process regulation of biosynthetic process regulation of protein metabolic process cellular metabolic process glycoprotein biosynthetic process regulation of cellular metabolic process regulation of macromolecule metabolic process glycoprotein metabolic process macromolecule biosynthetic process regulation of glycoprotein metabolic process regulation of cellular biosynthetic process biosynthetic process regulation of macromolecule biosynthetic process regulation of metabolic process positive regulation of cellular biosynthetic process behavior adult behavior oligodendrocyte development cellular developmental process central nervous system myelination cell development glial cell development myelination neurogenesis axon ensheathment in central nervous system gliogenesis oligodendrocyte differentiation glial cell differentiation axon ensheathment ensheathment of neurons cell differentiation gene expression protein maturation proteolysis protein processing amyloid-beta metabolic process amide metabolic process amyloid-beta formation membrane protein intracellular domain proteolysis membrane protein proteolysis multicellular organismal-level homeostasis homeostatic process homeostasis of number of cells myeloid cell homeostasis epithelial cell proliferation Notch receptor processing neuron apoptotic process apoptotic process cell death programmed cell death system process learning or memory nervous system process cognition positive regulation of molecular function regulation of molecular function regulation of catalytic activity positive regulation of catalytic activity membrane protein ectodomain proteolysis positive regulation of peptidase activity regulation of proteolysis regulation of endopeptidase activity regulation of peptidase activity positive regulation of hydrolase activity positive regulation of endopeptidase activity regulation of hydrolase activity positive regulation of proteolysis	membrane cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery sarcolemma plasma membrane membrane cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery sarcolemma plasma membrane presynapse synapse cell junction presynaptic membrane plasma membrane region synaptic membrane vacuolar membrane intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome Golgi apparatus endomembrane system Golgi membrane endosome membrane endosome intracellular vesicle cytoplasmic vesicle membrane vesicle membrane cytoplasmic vesicle transport vesicle synaptic vesicle secretory vesicle exocytic vesicle anchoring junction focal adhesion cell-substrate junction pigment granule melanosome azurophil granule secretory granule primary lysosome azurophil granule membrane secretory granule membrane protein-containing complex catalytic complex plasma membrane protein complex membrane protein complex gamma-secretase complex organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane early endosome
B	Presenilin-1	aspartic-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity aspartic endopeptidase activity, intramembrane cleaving aspartic-type endopeptidase activity catalytic activity endopeptidase activity cell adhesion molecule binding cadherin binding protein binding binding PDZ domain binding protein domain specific binding aspartic-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity aspartic endopeptidase activity, intramembrane cleaving aspartic-type endopeptidase activity catalytic activity endopeptidase activity cell adhesion molecule binding cadherin binding protein binding binding PDZ domain binding protein domain specific binding signaling receptor binding growth factor receptor binding beta-catenin binding calcium channel activity monoatomic cation transmembrane transporter activity monoatomic ion channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity inorganic molecular entity transmembrane transporter activity channel activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity ATPase binding enzyme binding	cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process cell surface receptor signaling pathway response to stimulus regulation of Wnt signaling pathway signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway biological regulation regulation of signal transduction cell communication regulation of response to stimulus cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process cell surface receptor signaling pathway response to stimulus regulation of Wnt signaling pathway signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway biological regulation regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication cellular process signal transduction Wnt signaling pathway inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis endoplasmic reticulum calcium ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis cellular localization sequestering of calcium ion maintenance of location in cell maintenance of location localization regulation of protein modification process regulation of protein phosphorylation negative regulation of biological process negative regulation of phosphate metabolic process negative regulation of cellular metabolic process regulation of primary metabolic process organic substance metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process negative regulation of protein modification process negative regulation of cellular process protein metabolic process protein modification process phosphorus metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process organonitrogen compound metabolic process protein phosphorylation phosphorylation regulation of protein metabolic process cellular metabolic process negative regulation of metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process negative regulation of protein phosphorylation macromolecule modification negative regulation of phosphorus metabolic process metabolic process regulation of phosphorylation regulation of phosphorus metabolic process macromolecule metabolic process negative regulation of phosphorylation regulation of metabolic process cerebral cortex cell migration developmental process multicellular organismal process head development forebrain development animal organ development brain development nervous system development pallium development cerebral cortex development multicellular organism development telencephalon cell migration central nervous system development forebrain cell migration anatomical structure development cell migration telencephalon development cell motility system development behavior system process learning or memory nervous system process cognition memory positive regulation of proteasomal protein catabolic process catabolic process positive regulation of protein metabolic process proteolysis involved in protein catabolic process positive regulation of biological process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process positive regulation of metabolic process positive regulation of ubiquitin-dependent protein catabolic process regulation of proteolysis regulation of proteolysis involved in protein catabolic process modification-dependent macromolecule catabolic process proteolysis positive regulation of macromolecule metabolic process organonitrogen compound catabolic process proteasomal protein catabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of proteolysis involved in protein catabolic process positive regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process positive regulation of proteolysis regulation of proteasomal protein catabolic process positive regulation of proteasomal ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process organic substance catabolic process regulation of protein catabolic process cerebellum development metencephalon development hindbrain development import into cell nitrogen compound transport carboxylic acid transmembrane transport transport amino acid transmembrane transport L-amino acid transport L-glutamate import L-glutamate import across plasma membrane organic acid transmembrane transport organic anion transport carboxylic acid transport organic substance transport import across plasma membrane establishment of localization organic acid transport transmembrane transport amino acid transport acidic amino acid transport dicarboxylic acid transport L-alpha-amino acid transmembrane transport amino acid import across plasma membrane L-glutamate transmembrane transport cellular developmental process astrocyte differentiation cell development astrocyte activation glial cell development neurogenesis astrocyte development gliogenesis cell differentiation response to stress defense response cell activation glial cell differentiation glial cell activation inflammatory response neuroinflammatory response amyloid precursor protein catabolic process amyloid precursor protein metabolic process anatomical structure morphogenesis skeletal system development skeletal system morphogenesis animal organ morphogenesis axonogenesis cell projection organization regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell development cell projection morphogenesis neuron differentiation neuron projection morphogenesis negative regulation of cellular component organization regulation of cell projection organization generation of neurons negative regulation of axonogenesis negative regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization regulation of developmental process plasma membrane bounded cell projection morphogenesis cell morphogenesis cellular component organization regulation of nervous system development negative regulation of neurogenesis regulation of axonogenesis negative regulation of nervous system development regulation of multicellular organismal process negative regulation of cell differentiation cellular component organization or biogenesis negative regulation of cell projection organization regulation of anatomical structure morphogenesis regulation of multicellular organismal development plasma membrane bounded cell projection organization negative regulation of developmental process axon development negative regulation of neuron projection development cell morphogenesis involved in neuron differentiation negative regulation of cell development neuron development regulation of plasma membrane bounded cell projection organization vasculature development blood vessel development circulatory system development negative regulation of RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II organic substance biosynthetic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process cellular biosynthetic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process regulation of RNA biosynthetic process regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process negative regulation of biosynthetic process Notch signaling pathway postsynapse organization regulation of postsynapse organization regulation of synapse organization cell junction organization regulation of synapse structure or activity synapse organization regulation of biological quality regulation of protein binding positive regulation of molecular function regulation of molecular function positive regulation of protein binding regulation of binding positive regulation of binding neuron cellular homeostasis amyloid-beta metabolic process amide metabolic process pyridine nucleotide catabolic process oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process regulation of generation of precursor metabolites and energy nucleoside phosphate catabolic process organic acid metabolic process regulation of ATP metabolic process cellular catabolic process regulation of purine nucleotide catabolic process regulation of small molecule metabolic process regulation of nucleotide metabolic process small molecule metabolic process purine ribonucleotide catabolic process nucleoside phosphate metabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process regulation of purine nucleotide metabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process positive regulation of carbohydrate metabolic process monocarboxylic acid metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process ATP metabolic process positive regulation of purine nucleotide catabolic process positive regulation of cellular metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process positive regulation of cellular process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process organic cyclic compound catabolic process purine-containing compound metabolic process ADP metabolic process purine ribonucleoside diphosphate metabolic process purine ribonucleoside diphosphate catabolic process ribonucleotide catabolic process positive regulation of phosphate metabolic process positive regulation of nucleotide catabolic process glycolytic process pyridine-containing compound metabolic process pyridine nucleotide metabolic process nicotinamide nucleotide metabolic process regulation of carbohydrate catabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of phosphorus metabolic process nucleotide metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of nucleotide catabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process positive regulation of nucleotide metabolic process purine nucleotide metabolic process ribonucleotide metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process regulation of carbohydrate metabolic process ribonucleoside triphosphate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process carbohydrate metabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy regulation of glycolytic process positive regulation of purine nucleotide metabolic process organophosphate metabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process positive regulation of small molecule metabolic process positive regulation of cellular component organization positive regulation of amyloid fibril formation regulation of amyloid fibril formation amyloid fibril formation positive regulation of supramolecular fiber organization regulation of supramolecular fiber organization supramolecular fiber organization somitogenesis epithelium development chordate embryonic development segmentation anterior/posterior pattern specification pattern specification process embryo development tissue development regionalization embryo development ending in birth or egg hatching somite development anatomical structure formation involved in morphogenesis autophagosome assembly organelle assembly vacuole organization macroautophagy autophagy autophagosome organization cellular component biogenesis organelle organization cellular component assembly process utilizing autophagic mechanism negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death brain morphogenesis negative regulation of signaling negative regulation of cell communication negative regulation of apoptotic signaling pathway negative regulation of response to stimulus negative regulation of signal transduction apoptotic signaling pathway regulation of apoptotic signaling pathway cell population proliferation epithelial cell proliferation neuron apoptotic process regulation of core promoter binding regulation of DNA binding negative regulation of binding regulation of transcription regulatory region DNA binding negative regulation of molecular function negative regulation of core promoter binding negative regulation of DNA binding negative regulation of transcription regulatory region DNA binding cell activation involved in immune response astrocyte activation involved in immune response immune response immune effector process immune system process monoatomic ion transport monoatomic cation transport calcium ion transport metal ion transport intracellular signal transduction mitochondrial transport negative regulation of gene expression regulation of tumor necrosis factor production positive regulation of macromolecule biosynthetic process positive regulation of tumor necrosis factor superfamily cytokine production positive regulation of biosynthetic process cytokine production regulation of cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production positive regulation of cellular biosynthetic process response to oxidative stress neuron projection maintenance neuron projection organization cellular response to nitrogen compound response to organic substance response to organonitrogen compound response to endogenous stimulus response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to chemical stimulus cellular response to organonitrogen compound response to chemical cellular response to organic substance response to amyloid-beta membrane protein proteolysis membrane protein ectodomain proteolysis cellular response to stress DNA damage response cell fate specification cell fate commitment positive regulation of coagulation coagulation regulation of coagulation regulation of localization positive regulation of L-glutamate import across plasma membrane positive regulation of amine transport regulation of L-glutamate import across plasma membrane positive regulation of transmembrane transport regulation of amino acid transport regulation of amino acid transmembrane transport regulation of transport positive regulation of organic acid transport amine transport regulation of amino acid import across plasma membrane regulation of transmembrane transport positive regulation of transport positive regulation of amino acid transport regulation of organic acid transport regulation of amine transport regulation of resting membrane potential regulation of membrane potential choline transport organic cation transport negative regulation of proteolysis negative regulation of proteolysis involved in protein catabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of catabolic process positive regulation of programmed cell death positive regulation of apoptotic process positive regulation of dendritic spine development regulation of dendritic spine development positive regulation of developmental process dendrite development dendritic spine development protein localization establishment of protein localization nucleocytoplasmic transport nuclear transport positive regulation of establishment of protein localization import into nucleus cellular macromolecule localization establishment of localization in cell regulation of intracellular transport positive regulation of protein localization to nucleus positive regulation of protein import into nucleus intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus establishment of protein localization to organelle positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport regulation of protein localization positive regulation of nucleocytoplasmic transport regulation of protein localization to nucleus positive regulation of protein transport regulation of protein import into nucleus protein import into nucleus positive regulation of intracellular transport regulation of establishment of protein localization regulation of protein transport regulation of cellular localization protein transport macromolecule localization protein localization to organelle Cajal-Retzius cell differentiation central nervous system neuron differentiation cerebral cortex neuron differentiation neural tube development tube development dorsal/ventral pattern formation dorsal/ventral neural tube patterning neural tube patterning skin development skin morphogenesis lymphocyte activation leukocyte activation T cell activation involved in immune response T cell activation leukocyte activation involved in immune response lymphocyte activation involved in immune response protein catabolic process at postsynapse protein catabolic process at synapse sensory organ development eye development retina development in camera-type eye visual system development neural retina development camera-type eye development sensory system development regulation of synaptic vesicle cycle synaptic vesicle cycle regulation of vesicle-mediated transport vesicle-mediated transport vesicle-mediated transport in synapse heart morphogenesis embryonic heart tube development tube morphogenesis embryonic heart tube morphogenesis heart looping determination of bilateral symmetry epithelial tube morphogenesis embryonic organ development determination of left/right symmetry specification of symmetry embryonic organ morphogenesis heart development embryonic morphogenesis morphogenesis of an epithelium determination of heart left/right asymmetry tissue morphogenesis left/right pattern formation immune response-regulating cell surface receptor signaling pathway positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process immune response-activating cell surface receptor signaling pathway T cell receptor signaling pathway regulation of immune response antigen receptor-mediated signaling pathway activation of immune response immune system development gland development hematopoietic or lymphoid organ development thymus development myeloid leukocyte differentiation myeloid dendritic cell activation hemopoiesis mononuclear cell differentiation myeloid leukocyte activation myeloid cell differentiation myeloid dendritic cell differentiation dendritic cell differentiation leukocyte differentiation protein maturation protein processing negative regulation of neuron apoptotic process regulation of neuron apoptotic process limb development appendage development embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis limb morphogenesis amyloid-beta formation regulation of receptor recycling receptor recycling receptor metabolic process positive regulation of receptor recycling positive regulation of signaling carbohydrate derivative biosynthetic process organonitrogen compound biosynthetic process glycoprotein biosynthetic process glycoprotein metabolic process protein glycosylation glycosylation macromolecule glycosylation locomotion Notch receptor processing smooth endoplasmic reticulum calcium ion homeostasis regulation of synaptic plasticity trans-synaptic signaling modulation of chemical synaptic transmission cell-cell signaling chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of RNA biosynthetic process positive regulation of phosphorylation positive regulation of protein modification process positive regulation of protein phosphorylation neuron migration cell adhesion cell-cell adhesion synaptic transmission, glutamatergic regulation of synaptic transmission, glutamatergic regulation of catalytic activity positive regulation of catalytic activity hematopoietic progenitor cell differentiation establishment of organelle localization regulated exocytosis synaptic vesicle targeting synaptic vesicle exocytosis vesicle targeting secretion by cell organelle localization signal release vesicle localization neurotransmitter secretion secretion establishment of vesicle localization export from cell neurotransmitter transport signal release from synapse exocytosis exocytic process post-embryonic development	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope organelle membrane endoplasmic reticulum membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope organelle membrane endoplasmic reticulum smooth endoplasmic reticulum cytoplasm neuromuscular junction synapse cell junction Golgi membrane Golgi apparatus bounding membrane of organelle ciliary rootlet cilium plasma membrane bounded cell projection cell projection cytoskeleton intracellular non-membrane-bounded organelle non-membrane-bounded organelle transport vesicle intracellular vesicle presynapse cytoplasmic vesicle synaptic vesicle secretory vesicle vesicle exocytic vesicle mitochondrial membrane organelle inner membrane mitochondrion mitochondrial inner membrane mitochondrial envelope cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane cell surface membrane microdomain membrane raft protein-containing complex catalytic complex plasma membrane protein complex membrane protein complex gamma-secretase complex organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome Z disc sarcomere I band contractile muscle fiber supramolecular fiber myofibril supramolecular polymer sarcolemma presynaptic membrane synaptic membrane glutamatergic synapse rough endoplasmic reticulum neuron projection vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome somatodendritic compartment dendrite dendritic tree dendritic shaft perinuclear region of cytoplasm cell body neuronal cell body postsynapse cell cortex centrosome microtubule organizing center microtubule cytoskeleton vesicle membrane azurophil granule cytoplasmic vesicle membrane secretory granule primary lysosome azurophil granule membrane secretory granule membrane growth cone axon distal axon site of polarized growth inclusion body aggresome membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nuclear outer membrane organelle outer membrane outer membrane endosome membrane early endosome endosome early endosome membrane
C	Gamma-secretase subunit APH-1A	protein-macromolecule adaptor activity molecular adaptor activity endopeptidase activator activity enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity endopeptidase regulator activity protein binding binding enzyme binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process biosynthetic process proteolysis organic substance biosynthetic process protein processing metabolic process cellular process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process biosynthetic process proteolysis organic substance biosynthetic process protein processing metabolic process cellular process protein metabolic process macromolecule metabolic process amyloid precursor protein catabolic process amyloid-beta metabolic process amide metabolic process amyloid precursor protein metabolic process amyloid-beta formation membrane protein intracellular domain proteolysis membrane protein proteolysis Notch receptor processing developmental process multicellular organism development multicellular organismal process metanephros development anatomical structure development animal organ development kidney development renal system development system development positive regulation of molecular function regulation of molecular function regulation of catalytic activity biological regulation positive regulation of catalytic activity cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling cell communication Notch signaling pathway signal transduction membrane protein ectodomain proteolysis positive regulation of protein metabolic process positive regulation of peptidase activity positive regulation of biological process regulation of primary metabolic process positive regulation of metabolic process regulation of proteolysis regulation of endopeptidase activity positive regulation of macromolecule metabolic process regulation of protein metabolic process regulation of peptidase activity regulation of macromolecule metabolic process positive regulation of hydrolase activity positive regulation of endopeptidase activity regulation of hydrolase activity positive regulation of proteolysis regulation of metabolic process	membrane cellular anatomical entity membrane-bounded organelle intracellular anatomical structure Golgi cisterna membrane Golgi apparatus subcompartment Golgi apparatus organelle subcompartment Golgi cisterna intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle Golgi stack membrane cellular anatomical entity membrane-bounded organelle intracellular anatomical structure Golgi cisterna membrane Golgi apparatus subcompartment Golgi apparatus organelle subcompartment Golgi cisterna intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle Golgi stack cytoplasm organelle membrane cell periphery plasma membrane presynapse synapse cell junction presynaptic membrane plasma membrane region synaptic membrane protein-containing complex catalytic complex plasma membrane protein complex membrane protein complex gamma-secretase complex endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane early endosome endosome intracellular vesicle cytoplasmic vesicle vesicle Golgi membrane bounding membrane of organelle endosome membrane cytoplasmic vesicle membrane vesicle membrane transport vesicle synaptic vesicle secretory vesicle exocytic vesicle
D	Gamma-secretase subunit PEN-2	endopeptidase activator activity enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity endopeptidase regulator activity protein binding binding enzyme binding	membrane protein intracellular domain proteolysis organic substance metabolic process organonitrogen compound metabolic process proteolysis membrane protein proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process Notch receptor processing amyloid precursor protein catabolic process amyloid precursor protein metabolic process positive regulation of molecular function regulation of molecular function membrane protein intracellular domain proteolysis organic substance metabolic process organonitrogen compound metabolic process proteolysis membrane protein proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process Notch receptor processing amyloid precursor protein catabolic process amyloid precursor protein metabolic process positive regulation of molecular function regulation of molecular function regulation of catalytic activity biological regulation positive regulation of catalytic activity cellular biosynthetic process cellular metabolic process gene expression macromolecule biosynthetic process protein maturation biosynthetic process organic substance biosynthetic process protein processing cellular process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling cell communication Notch signaling pathway signal transduction membrane protein ectodomain proteolysis positive regulation of protein metabolic process positive regulation of peptidase activity positive regulation of biological process regulation of primary metabolic process positive regulation of metabolic process regulation of proteolysis regulation of endopeptidase activity positive regulation of macromolecule metabolic process regulation of protein metabolic process regulation of peptidase activity regulation of macromolecule metabolic process positive regulation of hydrolase activity positive regulation of endopeptidase activity regulation of hydrolase activity positive regulation of proteolysis regulation of metabolic process amyloid-beta metabolic process amide metabolic process amyloid-beta formation	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane bounding membrane of organelle organelle membrane Golgi cisterna membrane membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane bounding membrane of organelle organelle membrane Golgi cisterna membrane Golgi apparatus subcompartment organelle subcompartment Golgi cisterna Golgi stack endosome membrane endosome intracellular vesicle cytoplasmic vesicle membrane vesicle membrane cytoplasmic vesicle vesicle cell periphery plasma membrane presynapse synapse cell junction presynaptic membrane plasma membrane region synaptic membrane protein-containing complex catalytic complex plasma membrane protein complex membrane protein complex gamma-secretase complex endoplasmic reticulum endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane
E	Amyloid-beta A4 protein	DNA binding binding organic cyclic compound binding nucleic acid binding protein binding signaling receptor binding cation binding transition metal ion binding ion binding metal ion binding small molecule binding PTB domain binding protein domain specific binding identical protein binding DNA binding binding organic cyclic compound binding nucleic acid binding protein binding signaling receptor binding cation binding transition metal ion binding ion binding metal ion binding small molecule binding PTB domain binding protein domain specific binding identical protein binding molecular function activator activity molecular function regulator activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity sequence-specific DNA binding double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity enzyme binding heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	negative regulation of long-term synaptic potentiation positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process negative regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling negative regulation of long-term synaptic potentiation positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process negative regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling biological regulation cell-cell signaling positive regulation of synaptic transmission chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of long-term synaptic potentiation regulation of cell communication cellular process positive regulation of signaling regulation of synapse structure or activity cellular response to stimulus multicellular organismal process regulation of postsynaptic membrane potential system process response to stimulus regulation of system process regulation of signal transduction chemical synaptic transmission, postsynaptic modulation of excitatory postsynaptic potential regulation of multicellular organismal process signal transduction cell surface receptor signaling pathway nervous system process regulation of nervous system process regulation of response to stimulus excitatory postsynaptic potential regulation of membrane potential positive regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette regulation of calcium-mediated signaling positive regulation of calcium-mediated signaling positive regulation of intracellular signal transduction calcium-mediated signaling cellular component organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization positive regulation of DNA-binding transcription factor activity cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process positive regulation of molecular function nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of molecular function organic cyclic compound metabolic process regulation of gene expression biosynthetic process regulation of DNA-binding transcription factor activity organic cyclic compound biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process regulation of peptidyl-serine phosphorylation positive regulation of cellular metabolic process positive regulation of phosphate metabolic process peptidyl-serine modification positive regulation of metabolic process positive regulation of protein modification process peptidyl-serine phosphorylation regulation of phosphate metabolic process phosphate-containing compound metabolic process peptidyl-amino acid modification positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein phosphorylation phosphorus metabolic process protein modification process organonitrogen compound metabolic process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of peptidyl-serine phosphorylation macromolecule modification regulation of phosphorus metabolic process regulation of phosphorylation regulation of multicellular organism growth developmental process regulation of growth regulation of developmental growth regulation of developmental process developmental growth growth multicellular organism growth axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development system development plasma membrane bounded cell projection organization nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development cell growth collateral sprouting in absence of injury collateral sprouting developmental cell growth developmental growth involved in morphogenesis positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process regulation of cytokine production cytokine production regulation of chemokine production positive regulation of gene expression chemokine production positive regulation of chemokine production positive regulation of multicellular organismal process positive regulation of cytokine production positive regulation of cellular biosynthetic process behavior suckling behavior feeding behavior astrocyte differentiation astrocyte activation glial cell development astrocyte development gliogenesis response to stress defense response cell activation central nervous system development glial cell differentiation glial cell activation inflammatory response neuroinflammatory response Notch signaling pathway cell cycle G2/M phase transition mitotic cell cycle process G2/M transition of mitotic cell cycle cell cycle phase transition cell cycle mitotic cell cycle cell cycle process mitotic cell cycle phase transition regulation of protein binding positive regulation of protein binding regulation of binding positive regulation of binding myeloid leukocyte activation leukocyte activation macrophage activation immune system process leukocyte activation involved in inflammatory response microglial cell activation cellular homeostasis neuron cellular homeostasis homeostatic process neuron recognition axon choice point recognition cell recognition axon midline choice point recognition axon guidance neuron projection guidance pyridine nucleotide catabolic process oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process regulation of generation of precursor metabolites and energy nucleoside phosphate catabolic process organic acid metabolic process regulation of ATP metabolic process cellular catabolic process regulation of purine nucleotide catabolic process regulation of small molecule metabolic process regulation of nucleotide metabolic process small molecule metabolic process purine ribonucleotide catabolic process nucleoside phosphate metabolic process organonitrogen compound catabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process regulation of purine nucleotide metabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process positive regulation of carbohydrate metabolic process monocarboxylic acid metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process ATP metabolic process positive regulation of purine nucleotide catabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process organic cyclic compound catabolic process purine-containing compound metabolic process positive regulation of catabolic process ADP metabolic process purine ribonucleoside diphosphate metabolic process organic substance catabolic process purine ribonucleoside diphosphate catabolic process ribonucleotide catabolic process positive regulation of nucleotide catabolic process glycolytic process pyridine-containing compound metabolic process pyridine nucleotide metabolic process nicotinamide nucleotide metabolic process regulation of carbohydrate catabolic process positive regulation of nucleobase-containing compound metabolic process nucleotide metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of nucleotide catabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process catabolic process positive regulation of nucleotide metabolic process purine nucleotide metabolic process ribonucleotide metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process regulation of carbohydrate metabolic process ribonucleoside triphosphate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process carbohydrate metabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy regulation of catabolic process regulation of glycolytic process positive regulation of purine nucleotide metabolic process organophosphate metabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process positive regulation of small molecule metabolic process myeloid leukocyte differentiation mononuclear cell differentiation microglia differentiation hemopoiesis macrophage differentiation microglia development myeloid cell differentiation myeloid cell development leukocyte differentiation regulation of cellular component organization positive regulation of cellular component organization positive regulation of amyloid fibril formation regulation of amyloid fibril formation amyloid fibril formation positive regulation of supramolecular fiber organization regulation of supramolecular fiber organization supramolecular fiber organization positive regulation of ERK1 and ERK2 cascade positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of long-term synaptic potentiation regulation of peptidyl-threonine phosphorylation peptidyl-threonine modification positive regulation of peptidyl-threonine phosphorylation peptidyl-threonine phosphorylation regulation of localization transport regulation of signaling receptor activity regulation of transmembrane transporter activity regulation of transporter activity localization regulation of NMDA receptor activity regulation of monoatomic ion transmembrane transporter activity regulation of transport establishment of localization transmembrane transport regulation of transmembrane transport regulation of neurotransmitter receptor activity cellular localization intracellular transport axo-dendritic transport establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process neuromuscular process neuromuscular process controlling balance organic hydroxy compound metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process secondary alcohol metabolic process lipid metabolic process cell junction organization synapse organization head development forebrain development animal organ development brain development regulation of Wnt signaling pathway Wnt signaling pathway neuron apoptotic process apoptotic process cell death programmed cell death ligand-gated ion channel signaling pathway ionotropic glutamate receptor signaling pathway glutamate receptor signaling pathway regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction cell activation involved in immune response astrocyte activation involved in immune response immune response immune effector process negative regulation of cellular metabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process negative regulation of metabolic process negative regulation of cellular biosynthetic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process positive regulation of cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle regulation of cell cycle regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production response to oxidative stress neuron projection maintenance neuron projection organization cellular response to nitrogen compound response to organic substance response to organonitrogen compound response to endogenous stimulus response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to chemical stimulus cellular response to organonitrogen compound response to chemical cellular response to organic substance response to amyloid-beta regulation of cell cycle phase transition positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process positive regulation of G2/M transition of mitotic cell cycle regulation of G2/M transition of mitotic cell cycle regulation of cell cycle process regulation of cell cycle G2/M phase transition positive regulation of cell cycle G2/M phase transition regulation of mitotic cell cycle phase transition positive regulation of cell cycle phase transition regulation of cell differentiation negative regulation of cell differentiation negative regulation of developmental process negative regulation of neuron differentiation regulation of neuron differentiation cytosolic mRNA polyadenylation mRNA metabolic process learning learning or memory cognition regulation of defense response regulation of response to external stimulus response to external stimulus regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stress positive regulation of defense response inorganic ion homeostasis intracellular copper ion homeostasis copper ion homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis developmental maturation neuron remodeling anatomical structure maturation neuron maturation cell maturation reproductive process multicellular organismal reproductive process reproductive behavior mating behavior peptidyl-tyrosine modification regulation of peptidyl-tyrosine phosphorylation peptidyl-tyrosine phosphorylation organonitrogen compound biosynthetic process post-transcriptional regulation of gene expression translation regulation of translation interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production regulation of neuronal synaptic plasticity regulation of long-term neuronal synaptic plasticity positive regulation of JNK cascade JNK cascade regulation of JNK cascade positive regulation of locomotion regulation of cell motility regulation of lymphocyte migration positive regulation of cell migration positive regulation of cell motility regulation of cell migration positive regulation of mononuclear cell migration cell migration regulation of immune system process cell motility regulation of mononuclear cell migration positive regulation of immune system process locomotion positive regulation of lymphocyte migration regulation of leukocyte migration positive regulation of T cell migration lymphocyte migration positive regulation of leukocyte migration leukocyte migration regulation of locomotion regulation of T cell migration mononuclear cell migration T cell migration cell adhesion transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of RNA biosynthetic process locomotory behavior adult locomotory behavior adult behavior interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production import into cell endocytosis vesicle-mediated transport regulation of presynapse assembly cellular component biogenesis regulation of presynapse organization cellular component assembly cell junction assembly regulation of synapse assembly presynapse organization regulation of cellular component biogenesis regulation of cell junction assembly regulation of synapse organization synapse assembly presynapse assembly spontaneous synaptic transmission regulation of spontaneous synaptic transmission response to cytokine response to interleukin-1 neuromuscular junction development synaptic assembly at neuromuscular junction response to light stimulus visual learning visual behavior associative learning response to radiation response to abiotic stimulus dendrite development negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation intracellular calcium ion homeostasis smooth endoplasmic reticulum calcium ion homeostasis calcium ion homeostasis endoplasmic reticulum calcium ion homeostasis regulation of catalytic activity regulation of transferase activity regulation of protein tyrosine kinase activity regulation of kinase activity regulation of epidermal growth factor-activated receptor activity regulation of protein kinase activity	somatodendritic compartment cell body perikaryon neuronal cell body cellular anatomical entity presynapse synapse cell junction presynaptic active zone cell-cell junction anchoring junction intracellular anatomical structure cytoplasm cytosol somatodendritic compartment cell body perikaryon neuronal cell body cellular anatomical entity presynapse synapse cell junction presynaptic active zone cell-cell junction anchoring junction intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum smooth endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system protein-containing complex receptor complex neuromuscular junction membrane-enclosed lumen intracellular organelle lumen endoplasmic reticulum lumen organelle lumen endosome intracellular vesicle recycling endosome cytoplasmic vesicle vesicle neuron spine neuron projection dendritic spine plasma membrane bounded cell projection cell projection postsynapse dendrite dendritic tree ciliary rootlet cilium cytoskeleton intracellular non-membrane-bounded organelle non-membrane-bounded organelle extracellular region extracellular space transport vesicle synaptic vesicle secretory vesicle exocytic vesicle cell surface cell periphery plasma membrane membrane membrane microdomain membrane raft Golgi apparatus subcompartment Golgi apparatus organelle subcompartment trans-Golgi network membrane trans-Golgi network organelle membrane clathrin-coated pit apical part of cell spindle spindle midzone microtubule cytoskeleton extracellular exosome extracellular vesicle extracellular organelle extracellular membrane-bounded organelle COPII-coated ER to Golgi transport vesicle coated vesicle nucleus organelle envelope lumen organelle envelope nuclear envelope lumen nuclear envelope dendritic shaft perinuclear region of cytoplasm vesicle lumen cytoplasmic vesicle lumen secretory granule lumen secretory granule platelet alpha granule platelet alpha granule lumen axon Golgi-associated vesicle growth cone distal axon site of polarized growth early endosome Golgi lumen endosome lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR041084	Nicastrin, small lobe	Domain
A	IPR008710	Nicastrin	Family
B	IPR006639	Presenilin/signal peptide peptidase	Family
B	IPR002031	Peptidase A22A, presenilin 1	Family
B	IPR042524	Presenilin, C-terminal	Homologous Superfamily
B	IPR001108	Peptidase A22A, presenilin	Family
C	IPR009294	Gamma-secretase subunit Aph-1	Family
D	IPR019379	Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit	Family
E	IPR013803	Amyloidogenic glycoprotein, amyloid-beta peptide	Domain
E	IPR008154	Amyloidogenic glycoprotein, extracellular	Domain
E	IPR036176	E2 domain superfamily	Homologous Superfamily
E	IPR024329	Amyloidogenic glycoprotein, E2 domain	Domain
E	IPR036669	Amyloidogenic glycoprotein, copper-binding domain superfamily	Homologous Superfamily
E	IPR019745	Amyloidogenic glycoprotein, intracellular domain, conserved site	Conserved Site
E	IPR011178	Amyloidogenic glycoprotein, copper-binding	Domain
E	IPR037071	Amyloidogenic glycoprotein, amyloid-beta peptide superfamily	Homologous Superfamily
E	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site	Conserved Site
E	IPR019744	Amyloidogenic glycoprotein, copper-binding domain conserved site	Conserved Site
E	IPR002223	Pancreatic trypsin inhibitor Kunitz domain	Domain
E	IPR015849	Amyloidogenic glycoprotein, heparin-binding	Domain
E	IPR036454	Amyloidogenic glycoprotein, heparin-binding domain superfamily	Homologous Superfamily
E	IPR011993	PH-like domain superfamily	Homologous Superfamily
E	IPR019543	Beta-amyloid precursor protein C-terminal	Domain
E	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily	Homologous Superfamily
E	IPR008155	Amyloidogenic glycoprotein	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q92542	Alzheimer disease acne inversa, familial, 1 hidradenitis suppurativa Hidradenitis suppurativa, familial astrocytic tumor glioblastoma large cell medulloblastoma oligodendroglioma atypical teratoid rhabdoid tumor malignant ependymoma osteosarcoma primitive neuroectodermal tumor malignant glioma pilocytic astrocytoma
B	Pharos: P49768	Alzheimer disease amyloidosis Pick disease frontotemporal dementia dilated cardiomyopathy neurodegenerative disease dilated cardiomyopathy 1U perinatal asphyxia cardiomyopathy semantic dementia acne inversa, familial, 3 Hidradenitis suppurativa, familial Alzheimer disease 3 behavioral variant of frontotemporal dementia ovarian cancer Alzheimer disease amyloidosis Pick disease frontotemporal dementia dilated cardiomyopathy neurodegenerative disease dilated cardiomyopathy 1U perinatal asphyxia cardiomyopathy semantic dementia acne inversa, familial, 3 Hidradenitis suppurativa, familial Alzheimer disease 3 behavioral variant of frontotemporal dementia ovarian cancer depressive disorder dilated cardiomyopathy 1A Down syndrome familial isolated dilated cardiomyopathy subependymal giant cell astrocytoma adenoma juvenile dermatomyositis ulcerative colitis Parkinson disease progressive non-fluent aphasia acquired metabolic disease IgA glomerulonephritis toxic encephalopathy osteosarcoma dementia familial dilated cardiomyopathy progressive supranuclear palsy hidradenitis suppurativa intellectual disability tuberculosis learning disability Alzheimer disease 4 malignant mesothelioma
C	Pharos: Q96BI3	Alzheimer disease bipolar disorder invasive ductal breast carcinoma malignant glioma ovarian cancer atopic eczema chronic obstructive pulmonary disease large cell medulloblastoma medulloblastoma pilocytic astrocytoma atypical teratoid rhabdoid tumor glioblastoma malignant ependymoma osteosarcoma
D	Pharos: Q9NZ42	acne inversa, familial, 2 Hidradenitis suppurativa, familial Dowling-Degos disease Alzheimer disease Dowling-Degos disease 1 diabetes mellitus hidradenitis suppurativa
E	Pharos: P05067	Alzheimer disease amyloidosis cerebral amyloid angiopathy dementia cerebral amyloid angiopathy, APP-related fragile X syndrome Down syndrome neurodegenerative disease Necrosis brain disease premature aging syndrome Alzheimer disease type 1 spinal cord disease dissociative amnesia amnestic disorder Alzheimer disease amyloidosis cerebral amyloid angiopathy dementia cerebral amyloid angiopathy, APP-related fragile X syndrome Down syndrome neurodegenerative disease Necrosis brain disease premature aging syndrome Alzheimer disease type 1 spinal cord disease dissociative amnesia amnestic disorder endogenous depression Gerstmann-Straussler-Scheinker syndrome osteosarcoma Huntington disease astrocytic tumor juvenile dermatomyositis ABeta amyloidosis, Arctic type Pick disease learning disability ABeta amyloidosis, Italian type Lewy body dementia prion disease cerebrovascular disorder malignant ependymoma amyotrophic lateral sclerosis ovarian cancer Parkinson disease atypical teratoid rhabdoid tumor large cell medulloblastoma ABeta amyloidosis, dutch type breast cancer ABetaL34V amyloidosis ACys amyloidosis psoriasis chronic obstructive pulmonary disease medulloblastoma depressive disorder Emery-Dreifuss muscular dystrophy oligodendroglioma anxiety disorder FRAXE intellectual disability head and neck cancer palsy periodic fever syndrome bipolar disorder ABeta amyloidosis, Iowa type polycystic ovary syndrome cardiomyopathy acquired metabolic disease lung carcinoma ADan amyloidosis rheumatoid arthritis dermatomyositis toxic encephalopathy