6IUG | pdb_00006iug

Cryo-EM structure of the plant actin filaments from Zea mays pollen


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyActin-like ATPases 8094250 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8094251 3000092 SCOP2B (2022-06-29)
DSCOP2 FamilyActin/HSP70 8094249 4000313 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyActin-like ATPases 8094251 3000092 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyActin-like ATPases 8094250 3000092 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8094250 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8094251 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8094250 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8094251 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8094250 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8094251 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EActin_1ste6iugE1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
EActin_2nde6iugE2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
DActin_1ste6iugD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
DActin_2nde6iugD2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
CActin_1ste6iugC1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
CActin_2nde6iugC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
BActin_1ste6iugB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
BActin_2nde6iugB2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
AActin_1ste6iugA2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
AActin_2nde6iugA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
E3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (utative)
D3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
D3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (utative)
C3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
C3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (utative)
B3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
B3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (utative)
A3.30.420.40 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
A3.90.640.10 Alpha Beta Alpha-Beta Complex Actin Chain A, domain 4CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00022Actin (Actin)Actin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
pollen F-actin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR020902Actin/actin-like conserved siteConserved Site
A, B, C, D, E
IPR004001Actin, conserved siteConserved Site
A, B, C, D, E
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
A, B, C, D, E
IPR004000Actin familyFamily