Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF08887,PF08906e6itwA1 A: a+b two layersX: SMI1/KNR4-like (From Topology)H: SMI1/KNR4-like (From Topology)T: SMI1/KNR4-likeF: PF08887,PF08906ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08906T6SS immunity protein Tdi1, C-terminal (T6SS_Tdi1_C)T6SS immunity protein Tdi1, C-terminalThis domain is found at the C-terminal region of the type VI secretion system (T6SS) immunity protein Tdi1 from Agrobacterium tumefaciens (Atu4351, Swiss:Q7CUQ2) and similar bacterial proteins Tdi1 is organised into a N-terminal GAD-related domain (P ...This domain is found at the C-terminal region of the type VI secretion system (T6SS) immunity protein Tdi1 from Agrobacterium tumefaciens (Atu4351, Swiss:Q7CUQ2) and similar bacterial proteins Tdi1 is organised into a N-terminal GAD-related domain (Pfam:PF08887) and a C-terminal domain likely to exist as an insertion in the GAD-like domain. This domain shows a two-stranded antiparallel beta-sheet and four helices. A positive groove that extends to both domains may be associated with nucleotide binding [1].
Domain
PF08887GAD-like domain (GAD-like)GAD-like domainThis domain is functionally uncharacterised, but it appears to be distantly related to the GAD domain Pfam:PF02938.Domain

InterPro: Protein Family Classification InterPro Database Homepage