6IQQ
Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6iqqa_ | All alpha proteins | alpha-alpha superhelix | TPR-like | Tetratricopeptide repeat (TPR) | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d6iqqb_ | All alpha proteins | alpha-alpha superhelix | TPR-like | Tetratricopeptide repeat (TPR) | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TPR_11_9 | e6iqqA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_9 | ECOD (1.6) |
B | TPR_11_9 | e6iqqB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_9 | ECOD (1.6) |
C | PDZ | e6iqqC1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ | ECOD (1.6) |
C | EUF08155 | e6iqqC3 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: EUF08155 | ECOD (1.6) |
C | Peptidase_S41 | e6iqqC2 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: Peptidase_S41 | ECOD (1.6) |
D | PDZ | e6iqqD2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ | ECOD (1.6) |
D | EUF08155 | e6iqqD3 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: EUF08155 | ECOD (1.6) |
D | Peptidase_S41 | e6iqqD1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: Peptidase_S41 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (utative) |
B | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17804 | Tail specific protease N-terminal domain (TSP_NTD) | Tail specific protease N-terminal domain | The N-terminal domain of tail specific proteases has a novel fold composed of 10 alpha helices [1]. | Domain | |
PF03572 | Peptidase family S41 (Peptidase_S41) | Peptidase family S41 | - | Family | |
PF11818 | C-terminal domain of tail specific protease (DUF3340) (DUF3340) | C-terminal domain of tail specific protease (DUF3340) | - | Family | |
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR050498 | Photosystem I assembly protein Ycf3 | Family | |
IPR019734 | Tetratricopeptide repeat | Repeat | |
IPR023605 | Lipoprotein NlpI | Family | |
IPR040573 | Tail specific protease, N-terminal domain | Domain | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR020992 | Tail specific protease, C-terminal | Domain | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR005151 | Tail specific protease | Domain | |
IPR001478 | PDZ domain | Domain | |
IPR004447 | C-terminal-processing peptidase S41A | Family |