6IP1
alpha-SNAP-SNARE subcomplex in the whole 20S complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SNARE fusion complex | 8043664 | 3001549 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SNARE fusion complex | 8043665 | 3001549 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SNARE fusion complex | 8043667 | 3001549 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TPR-like | 8098940 | 3001345 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | TPR-like | 8098940 | 3001345 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | TPR-like | 8098940 | 3001345 | SCOP2B (2022-06-29) |
H | SCOP2 Family | Tetratricopeptide repeat (TPR) | 8098939 | 4001344 | SCOP2 (2022-06-29) |
H | SCOP2 Superfamily | TPR-like | 8098940 | 3001345 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Synaptobrevin | e6ip1A1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
E | TPR_15 | e6ip1E1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_15 | ECOD (1.6) |
F | TPR_15 | e6ip1F1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_15 | ECOD (1.6) |
G | TPR_15 | e6ip1G1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_15 | ECOD (1.6) |
H | TPR_15 | e6ip1H1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_15 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (utative) | |
D | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00957 | Synaptobrevin (Synaptobrevin) | Synaptobrevin | - | Family | |
PF05739 | SNARE domain (SNARE) | SNARE domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016444 | Synaptobrevin/Vesicle-associated membrane protein | Family | |
IPR042855 | v-SNARE, coiled-coil homology domain | Domain | |
IPR001388 | Synaptobrevin-like | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR006012 | Syntaxin/epimorphin, conserved site | Conserved Site | |
IPR010989 | SNARE | Homologous Superfamily | |
IPR006011 | Syntaxin, N-terminal domain | Domain | |
IPR045242 | Syntaxin | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain | |
IPR000744 | NSF attachment protein | Family | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily |