6IIO | pdb_00006iio

Cryo-EM structure of CV-A10 native empty particle


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd6iioc_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) automated matches (Coxsackievirus A10 ) [TaxId: 42769 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8068046 3000918 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRibosomal_L1e6iioC1 A: alpha bundlesX: PriB N-terminal domain-likeH: HTHT: SH3F: Ribosomal_L1ECOD (develop294)
BRibosomal_L1e6iioB1 A: alpha bundlesX: PriB N-terminal domain-likeH: HTHT: SH3F: Ribosomal_L1ECOD (develop294)
ARibosomal_L1e6iioA1 A: alpha bundlesX: PriB N-terminal domain-likeH: HTHT: SH3F: Ribosomal_L1ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
VP3
VP0
VP1