Structure of PSI-LHCI
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I | SCOP2 Family | Subunit VIII of photosystem I reaction centre, PsaI | 8102614 | 4002098 | SCOP2 (2022-06-29) |
| I | SCOP2 Superfamily | Subunit VIII of photosystem I reaction centre, PsaI | 8102615 | 3000819 | SCOP2 (2022-06-29) |
| H | SCOP2 Family | Photosystem I reaction centre subunit VI | 8102612 | 4007266 | SCOP2 (2022-06-29) |
| H | SCOP2 Superfamily | Photosystem I reaction centre subunit VI | 8102613 | 3002733 | SCOP2 (2022-06-29) |
| F | SCOP2 Family | Subunit III of photosystem I reaction centre, PsaF | 8094185 | 4002091 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8094186 | 3000813 | SCOP2 (2022-06-29) |
| E | SCOP2 Family | Photosystem I accessory protein E (PsaE) | 8094892 | 4001749 | SCOP2 (2022-06-29) |
| E | SCOP2 Superfamily | Electron transport accessory proteins | 8094893 | 3000325 | SCOP2 (2022-06-29) |
| D | SCOP2 Family | Photosystem I subunit PsaD | 8094948 | 4003498 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | Photosystem I subunit PsaD | 8094949 | 3000951 | SCOP2 (2022-06-29) |
| C | SCOP2 Family | 7-Fe ferredoxin | 8093805 | 4001227 | SCOP2 (2022-06-29) |
| C | SCOP2 Superfamily | 4Fe-4S ferredoxins | 8093806 | 3000020 | SCOP2 (2022-06-29) |
| W [auth M] | SCOP2 Family | Subunit XII of photosystem I reaction centre, PsaM | 8096157 | 4002104 | SCOP2 (2022-06-29) |
| W [auth M] | SCOP2 Superfamily | Subunit XII of photosystem I reaction centre, PsaM | 8096158 | 3000829 | SCOP2 (2022-06-29) |
| V [auth 0] | SCOP2 Family | Chlorophyll a-b binding protein | 8096871 | 4001763 | SCOP2 (2022-06-29) |
| V [auth 0] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096872 | 3000343 | SCOP2 (2022-06-29) |
| B | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8094494 | 4002118 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8094495 | 3000850 | SCOP2 (2022-06-29) |
| U [auth 9] | SCOP2 Family | Chlorophyll a-b binding protein | 8096869 | 4001763 | SCOP2 (2022-06-29) |
| U [auth 9] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096870 | 3000343 | SCOP2 (2022-06-29) |
| S [auth 7] | SCOP2 Family | Chlorophyll a-b binding protein | 8096867 | 4001763 | SCOP2 (2022-06-29) |
| S [auth 7] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096868 | 3000343 | SCOP2 (2022-06-29) |
| Q [auth 6] | SCOP2 Family | Chlorophyll a-b binding protein | 8096865 | 4001763 | SCOP2 (2022-06-29) |
| Q [auth 6] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096866 | 3000343 | SCOP2 (2022-06-29) |
| T [auth 8] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8096864 | 3000343 | SCOP2B (2022-06-29) |
| P [auth 4] | SCOP2 Family | Chlorophyll a-b binding protein | 8096863 | 4001763 | SCOP2 (2022-06-29) |
| P [auth 4] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096864 | 3000343 | SCOP2 (2022-06-29) |
| O [auth 3] | SCOP2 Family | Chlorophyll a-b binding protein | 8096861 | 4001763 | SCOP2 (2022-06-29) |
| O [auth 3] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096862 | 3000343 | SCOP2 (2022-06-29) |
| N [auth 2] | SCOP2 Family | Chlorophyll a-b binding protein | 8096859 | 4001763 | SCOP2 (2022-06-29) |
| N [auth 2] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096860 | 3000343 | SCOP2 (2022-06-29) |
| R [auth 5] | SCOP2 Family | Chlorophyll a-b binding protein | 8096857 | 4001763 | SCOP2 (2022-06-29) |
| R [auth 5] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8096858 | 3000343 | SCOP2 (2022-06-29) |
| M [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8096858 | 3000343 | SCOP2B (2022-06-29) |
| L | SCOP2 Family | Photosystem I reaction center subunit XI, PsaL | 8095786 | 4002135 | SCOP2 (2022-06-29) |
| L | SCOP2 Superfamily | Photosystem I reaction center subunit XI, PsaL | 8095787 | 3000870 | SCOP2 (2022-06-29) |
| J | SCOP2 Family | Subunit IX of photosystem I reaction centre, PsaJ | 8095330 | 4002101 | SCOP2 (2022-06-29) |
| J | SCOP2 Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8095331 | 3000824 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8094492 | 4002118 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8094493 | 3000850 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | EipB_like | e6igzI1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| H | EipB_like | e6igzH1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| G | EipB_like | e6igzG1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| F | EipB_like | e6igzF1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| E | EipB_like | e6igzE1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| D | EipB_like | e6igzD1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| C | EipB_like | e6igzC1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| W [auth M] | EipB_like | e6igzM1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| V [auth 0] | EipB_like | e6igz01 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| B | EipB_like | e6igzB1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| U [auth 9] | EipB_like | e6igz91 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| S [auth 7] | AAA_lid_3 | e6igz71 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: AAA_lid_3 | ECOD (v294.1) |
| Q [auth 6] | EipB_like | e6igz61 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| T [auth 8] | NTP_transf_2 | e6igz81 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| P [auth 4] | EipB_like | e6igz41 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| O [auth 3] | EipB_like | e6igz31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| N [auth 2] | EipB_like | e6igz21 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| R [auth 5] | EipB_like | e6igz51 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| M [auth 1] | NTP_transf_2 | e6igz11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| L | EipB_like | e6igzL1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| K | EipB_like | e6igzK1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| J | EipB_like | e6igzJ1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
| A | EipB_like | e6igzA1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EipB_like | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| F | 1.10.8.110 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
| E | 2.30.30.50 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
| D | 3.30.1470.10 | Alpha Beta | 2-Layer Sandwich | Photosystem 1 Reaction Centre Subunit Ii | Chain: D | CATH (utative) |
| C | 3.30.70.20 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| B | 1.20.1130.10 | Mainly Alpha | Up-down Bundle | Photosystem I p700 chlorophyll A apoprotein A1 | Photosystem I PsaA/PsaB | CATH (utative) |
| J | 1.20.5.510 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
| A | 1.20.1130.10 | Mainly Alpha | Up-down Bundle | Photosystem I p700 chlorophyll A apoprotein A1 | Photosystem I PsaA/PsaB | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Photosystem I |














