Coping with strong translational non-crystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| B [auth O] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| C [auth N] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| F [auth C] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| G [auth K] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| H [auth M] | SCOP2 Family | Ras-like monodomain GTPases | 8093771 | 4004043 | SCOP2 (2022-06-29) |
| H [auth M] | SCOP2 Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2 (2022-06-29) |
| J [auth P] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| P [auth L] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| N [auth I] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
| I [auth D] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RsmJ | e6hufA1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: RsmJ | ECOD (v294.1) |
| B [auth O] | LptF_LptG | e6hufO1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| C [auth N] | LptF_LptG | e6hufN1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| D [auth B] | LptF_LptG | e6hufB1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| E | LptF_LptG | e6hufE1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| F [auth C] | LptF_LptG | e6hufC1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| G [auth K] | LptF_LptG | e6hufK1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| H [auth M] | LptF_LptG | e6hufM1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| J [auth P] | LptF_LptG | e6hufP1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| K [auth F] | LptF_LptG | e6hufF1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| L [auth J] | LptF_LptG | e6hufJ1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| M [auth G] | LptF_LptG | e6hufG1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| O [auth H] | LptF_LptG | e6hufH1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| P [auth L] | LptF_LptG | e6hufL1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| N [auth I] | LptF_LptG | e6hufI1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
| I [auth D] | LptF_LptG | e6hufD1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: LptF_LptG | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041837 | Rab27a/b | Family | |
| IPR050305 | Small GTPase superfamily, Rab | Family | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
| IPR005225 | Small GTP-binding domain | Domain | |
| IPR001806 | Small GTPase | Family |














