6HUF
Coping with strong translational non-crystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
C [auth N] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
I [auth D] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
K [auth F] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
L [auth J] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
M [auth G] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
N [auth I] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
O [auth H] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
B [auth O] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
D [auth B] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
F [auth C] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
G [auth K] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
H [auth M] | SCOP2 Family | Ras-like monodomain GTPases | 8093771 | 4004043 | SCOP2 (2021-05-27) |
H [auth M] | SCOP2 Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2 (2021-05-27) |
J [auth P] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
P [auth L] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8093772 | 3002022 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00071 | e6hufA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
C [auth N] | PF00071 | e6hufN1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
E | PF00071 | e6hufE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
I [auth D] | PF00071 | e6hufD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
K [auth F] | PF00071 | e6hufF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
L [auth J] | PF00071 | e6hufJ1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
M [auth G] | PF00071 | e6hufG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
N [auth I] | PF00071 | e6hufI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
O [auth H] | PF00071 | e6hufH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
B [auth O] | PF00071 | e6hufO1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
D [auth B] | PF00071 | e6hufB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
F [auth C] | PF00071 | e6hufC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
G [auth K] | PF00071 | e6hufK1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
H [auth M] | PF00071 | e6hufM1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
J [auth P] | PF00071 | e6hufP1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
P [auth L] | PF00071 | e6hufL1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041837 | Rab27a/b | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR001806 | Small GTPase | Family | |
IPR005225 | Small GTP-binding protein domain | Domain |