6HM2 | pdb_00006hm2

Structure in P1 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6hm2a1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	automated matches	automated matches	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
A	d6hm2a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
B	d6hm2b1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	automated matches	automated matches	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
B	d6hm2b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
C	d6hm2c1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	automated matches	automated matches	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
C	d6hm2c2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
D	d6hm2d1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	automated matches	automated matches	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
D	d6hm2d2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
E	d6hm2e1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	automated matches	automated matches	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)
E	d6hm2e2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens LBA4213 (Ach5) ) [TaxId: 1435057 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Oxidored_q2	e6hm2A1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Oxidored_q2	ECOD (develop294)
B	Oxidored_q2	e6hm2B1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Oxidored_q2	ECOD (develop294)
C	Oxidored_q2	e6hm2C1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Oxidored_q2	ECOD (develop294)
D	Oxidored_q2	e6hm2D1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Oxidored_q2	ECOD (develop294)
E	Oxidored_q2	e6hm2E1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Oxidored_q2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (4.3.0)
B	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (4.3.0)
C	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (4.3.0)
D	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (4.3.0)
E	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (4.3.0)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.