Structure of the rabbit collided di-ribosome (stalled monosome)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| V [auth V1] | SCOP2B Superfamily | Ribosomal protein S10 | 8097814 | 3001336 | SCOP2B (2022-06-29) |
| DA [auth d1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095265 | 3000135 | SCOP2B (2022-06-29) |
| FA [auth f1] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053455 | 3002190 | SCOP2B (2022-06-29) |
| VA [auth N3] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082477 | 3000210 | SCOP2B (2022-06-29) |
| FB [auth X3] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8095966 | 3000210 | SCOP2B (2022-06-29) |
| GB [auth Y3] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076754 | 3000334 | SCOP2B (2022-06-29) |
| XB [auth p3] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101435 | 3001320 | SCOP2B (2022-06-29) |
| IC [auth u3] | SCOP2B Superfamily | Ribosomal protein L1p/L10e-like | 8065344 | 3001911 | SCOP2B (2022-06-29) |
| GC [auth I3] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8097320 | 3000884 | SCOP2B (2022-06-29) |
| DC [auth J3] | SCOP2B Superfamily | RL5-like | 8073894 | 3001709 | SCOP2B (2022-06-29) |
| TB [auth l3] | SCOP2B Superfamily | Ribosomal protein L39e | 8095597 | 3001756 | SCOP2B (2022-06-29) |
| G [auth G1] | SCOP2B Superfamily | Ribosomal protein S7 | 8066001 | 3000799 | SCOP2B (2022-06-29) |
| QB [auth i3] | SCOP2B Superfamily | Ribosomal protein L36e | 8053119 | 3002161 | SCOP2B (2022-06-29) |
| NB [auth f3] | SCOP2B Superfamily | Translational proteins | 8093714 | 3000811 | SCOP2B (2022-06-29) |
| MB [auth e3] | SCOP2B Superfamily | Ribosomal protein L32e | 8102088 | 3000982 | SCOP2B (2022-06-29) |
| KB [auth c3] | SCOP2B Superfamily | L30e-like | 8094953 | 3001739 | SCOP2B (2022-06-29) |
| DB [auth V3] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072048 | 3000433 | SCOP2B (2022-06-29) |
| OA [auth B3] | SCOP2B Superfamily | Translational proteins | 8078357 | 3000811 | SCOP2B (2022-06-29) |
| JA [auth k1] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8089861 | 3002020 | SCOP2B (2022-06-29) |
| JA [auth k1] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8089860 | 3002020 | SCOP2B (2022-06-29) |
| JA [auth k1] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8089857 | 3000020 | SCOP2B (2022-06-29) |
| EA [auth e1] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052584 | 3000068 | SCOP2B (2022-06-29) |
| C [auth C1] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053216 | 3002166 | SCOP2B (2022-06-29) |
| AA [auth a1] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090991 | 3000034 | SCOP2B (2022-06-29) |
| X [auth X1] | SCOP2B Superfamily | Ribosomal protein S8 | 8079081 | 3000709 | SCOP2B (2022-06-29) |
| T [auth T1] | SCOP2B Superfamily | S13-like H2TH domain | 8101439 | 3000053 | SCOP2B (2022-06-29) |
| R [auth R1] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082683 | 3000100 | SCOP2B (2022-06-29) |
| O [auth O1] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052971 | 3001284 | SCOP2B (2022-06-29) |
| O [auth O1] | SCOP2B Superfamily | Homeodomain-like | 8052970 | 3000001 | SCOP2B (2022-06-29) |
| N [auth N1] | SCOP2B Superfamily | L30e-like | 8063980 | 3001739 | SCOP2B (2022-06-29) |
| M [auth M1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052707 | 3000135 | SCOP2B (2022-06-29) |
| M [auth M1] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052708 | 3002138 | SCOP2B (2022-06-29) |
| L [auth L1] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055720 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth D1] | Ribosomal_L1 | e6hcmD11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| H [auth H1] | Ribosomal_L1 | e6hcmH11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| V [auth V1] | Ribosomal_L1 | e6hcmV11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| CA [auth c1] | Ribosomal_L1 | e6hcmc11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| DA [auth d1] | Ribosomal_L1 | e6hcmd11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| FA [auth f1] | Ribosomal_L1 | e6hcmf11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| HA [auth h1] | Ribosomal_L1 | e6hcmh11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| PA [auth C3] | Ald_deCOase | e6hcmC31 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| UA [auth M3] | Ribosomal_L1 | e6hcmM31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| VA [auth N3] | Ribosomal_L1 | e6hcmN31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| WA [auth O3] | Ribosomal_L1 | e6hcmO31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| XA [auth P3] | Ribosomal_L1 | e6hcmP31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| EB [auth W3] | Ribosomal_L1 | e6hcmW31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| FB [auth X3] | Ribosomal_L1 | e6hcmX31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| GB [auth Y3] | Ribosomal_L1 | e6hcmY31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| HB [auth Z3] | Ribosomal_L1 | e6hcmZ31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| IB [auth a3] | Ribosomal_L1 | e6hcma31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| JB [auth b3] | Ribosomal_L1 | e6hcmb31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| PB [auth h3] | Ribosomal_L1 | e6hcmh31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| XB [auth p3] | Ribosomal_L1 | e6hcmp31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| FC [auth D3] | Ribosomal_L1 | e6hcmD31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| IC [auth u3] | Ribosomal_L1 | e6hcmu31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| I [auth I1] | Ribosomal_L1 | e6hcmI11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| GC [auth I3] | Ribosomal_L1 | e6hcmI31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| EC [auth G3] | Ribosomal_L1 | e6hcmG31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| DC [auth J3] | Ribosomal_L1 | e6hcmJ31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| AC [auth t3] | Ribosomal_L1 | e6hcmt31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| ZB [auth s3] | Ribosomal_L1 | e6hcms31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| YB [auth r3] | Ribosomal_L1 | e6hcmr31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| WB [auth o3] | Ribosomal_L1 | e6hcmo31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| VB [auth n3] | Ribosomal_L1 | e6hcmn31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| UB [auth m3] | Ribosomal_L1 | e6hcmm31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| TB [auth l3] | Ribosomal_L1 | e6hcml31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| SB [auth k3] | Ribosomal_L1 | e6hcmk31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| RB [auth j3] | Ribosomal_L1 | e6hcmj31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| G [auth G1] | Ribosomal_L1 | e6hcmG11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| QB [auth i3] | Ribosomal_L1 | e6hcmi31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| OB [auth g3] | Ribosomal_L1 | e6hcmg31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| NB [auth f3] | Ribosomal_L1 | e6hcmf31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| MB [auth e3] | Ribosomal_L1 | e6hcme31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| LB [auth d3] | Ribosomal_L1 | e6hcmd31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| KB [auth c3] | Ribosomal_L1 | e6hcmc31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| F [auth F1] | Ribosomal_L1 | e6hcmF11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| DB [auth V3] | Ribosomal_L1 | e6hcmV31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| CB [auth U3] | Ribosomal_L1 | e6hcmU31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| BB [auth T3] | Ribosomal_L1 | e6hcmT31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| AB [auth S3] | Ribosomal_L1 | e6hcmS31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| ZA [auth R3] | Ribosomal_L1 | e6hcmR31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| YA [auth Q3] | Ribosomal_L1 | e6hcmQ31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| E [auth E1] | Ribosomal_L1 | e6hcmE11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| TA [auth L3] | Ribosomal_L1 | e6hcmL31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| SA [auth H3] | Ribosomal_L1 | e6hcmH31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| RA [auth F3] | Ribosomal_L1 | e6hcmF31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| QA [auth E3] | Ribosomal_L1 | e6hcmE31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| OA [auth B3] | Ribosomal_L1 | e6hcmB31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| NA [auth A3] | Ribosomal_L1 | e6hcmA31 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| JA [auth k1] | Ribosomal_L1 | e6hcmk11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| IA [auth j1] | Ribosomal_L1 | e6hcmj11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| GA [auth g1] | Ribosomal_L1 | e6hcmg11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| EA [auth e1] | Ribosomal_L1 | e6hcme11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| C [auth C1] | Ribosomal_L1 | e6hcmC11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| BA [auth b1] | Ribosomal_L1 | e6hcmb11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| AA [auth a1] | Ribosomal_L1 | e6hcma11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| Z [auth Z1] | Ribosomal_L1 | e6hcmZ11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| Y [auth Y1] | Ribosomal_L1 | e6hcmY11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| X [auth X1] | Ribosomal_L1 | e6hcmX11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| W [auth W1] | Ribosomal_L1 | e6hcmW11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| U [auth U1] | Ribosomal_L1 | e6hcmU11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| T [auth T1] | Ribosomal_L1 | e6hcmT11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| B [auth B1] | Ribosomal_L1 | e6hcmB11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| S [auth S1] | Ribosomal_L1 | e6hcmS11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| R [auth R1] | Ribosomal_L1 | e6hcmR11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| Q [auth Q1] | Ribosomal_L1 | e6hcmQ11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| P [auth P1] | Ribosomal_L1 | e6hcmP11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| O [auth O1] | Ribosomal_L1 | e6hcmO11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| N [auth N1] | Ribosomal_L1 | e6hcmN11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| M [auth M1] | Ribosomal_L1 | e6hcmM11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| L [auth L1] | Ribosomal_L1 | e6hcmL11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| K [auth K1] | Ribosomal_L1 | e6hcmK11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
| J [auth J1] | Ribosomal_L1 | e6hcmJ11 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Ribosomal_L1 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth D1] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| H [auth H1] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| H [auth H1] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| V [auth V1] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| PA [auth C3] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| UA [auth M3] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| VA [auth N3] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| XA [auth P3] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| XA [auth P3] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| EB [auth W3] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| FB [auth X3] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| GB [auth Y3] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| GB [auth Y3] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| FC [auth D3] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| FC [auth D3] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| FC [auth D3] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |
| I [auth I1] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| GC [auth I3] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| GC [auth I3] | PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family |
| DC [auth J3] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| DC [auth J3] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
| DC [auth J3] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| G [auth G1] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| G [auth G1] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| DB [auth V3] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| CB [auth U3] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
| BB [auth T3] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| BB [auth T3] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| ZA [auth R3] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| E [auth E1] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| E [auth E1] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| E [auth E1] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| TA [auth L3] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| SA [auth H3] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| SA [auth H3] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| RA [auth F3] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| RA [auth F3] | PF01247 | Ribosomal protein L35Ae (Ribosomal_L35Ae) | Ribosomal protein L35Ae | This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. | Domain |
| QA [auth E3] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| QA [auth E3] | PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family |
| NA [auth A3] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| C [auth C1] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| X [auth X1] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| T [auth T1] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| R [auth R1] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| Q [auth Q1] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| O [auth O1] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| N [auth N1] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| M [auth M1] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| M [auth M1] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| L [auth L1] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| K [auth K1] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| K [auth K1] | PF04068 | Possible Fer4-like domain in RNase L inhibitor, RLI (Fer4_RLI) | Possible Fer4-like domain in RNase L inhibitor, RLI | - | Family |
| K [auth K1] | PF00037 | 4Fe-4S binding domain (Fer4) | 4Fe-4S binding domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. | Domain |
| K [auth K1] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| K [auth K1] | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |














