6HBK | pdb_00006hbk

Echovirus 18 Open particle without one pentamer


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
X [auth K]MS_channel_2nde6hbkK1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
U [auth N]MS_channel_2nde6hbkN1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
R [auth Q]MS_channel_2nde6hbkQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
O [auth T]MS_channel_2nde6hbkT1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
L [auth W]MS_channel_2nde6hbkW1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
I [auth Z]MS_channel_2nde6hbkZ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
GA [auth B]MS_channel_2nde6hbkB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
F [auth c]MS_channel_2nde6hbkc1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
DA [auth E]MS_channel_2nde6hbkE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
C [auth f]MS_channel_2nde6hbkf1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
AA [auth H]MS_channel_2nde6hbkH1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Y [auth L]MS_channel_2nde6hbkL1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
V [auth O]MS_channel_2nde6hbkO1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
S [auth R]MS_channel_2nde6hbkR1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
P [auth U]MS_channel_2nde6hbkU1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
M [auth X]MS_channel_2nde6hbkX1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
J [auth a]MS_channel_2nde6hbka1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
G [auth d]MS_channel_2nde6hbkd1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
FA [auth C]MS_channel_2nde6hbkC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
EA [auth F]MS_channel_2nde6hbkF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
BA [auth I]MS_channel_2nde6hbkI1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
B [auth g]MS_channel_2nde6hbkg1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Z [auth G]MS_channel_2nde6hbkG1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
W [auth J]MS_channel_2nde6hbkJ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
T [auth M]MS_channel_2nde6hbkM1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Q [auth P]MS_channel_2nde6hbkP1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
N [auth S]MS_channel_2nde6hbkS1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
K [auth V]MS_channel_2nde6hbkV1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
H [auth Y]MS_channel_2nde6hbkY1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
E [auth b]MS_channel_2nde6hbkb1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
D [auth e]MS_channel_2nde6hbke1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
CA [auth D]MS_channel_2nde6hbkD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
AMS_channel_2nde6hbkA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
X [auth K]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
U [auth N]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
R [auth Q]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
O [auth T]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
L [auth W]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
I [auth Z]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
GA [auth B]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
F [auth c]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
DA [auth E]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
C [auth f]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
AA [auth H]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
Y [auth L]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
V [auth O]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
S [auth R]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
P [auth U]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
M [auth X]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
J [auth a]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
G [auth d]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
FA [auth C]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
EA [auth F]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
BA [auth I]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B [auth g]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
Z [auth G]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
W [auth J]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
T [auth M]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
Q [auth P]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
N [auth S]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
K [auth V]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
H [auth Y]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
E [auth b]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
D [auth e]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
CA [auth D]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Echovirus 18 capsid protein 3
Echovirus 18 capsid protein 2
Echovirus 18 capsid protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain