6HBD | pdb_00006hbd

Crystal structure of MSMEG_1712 from Mycobacterium smegmatis in complex with Beta-D-Galactofuranose

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyType 1 solute binding protein-like 8096990 3000125 SCOP2B (2022-06-29)
ASCOP2 FamilyL-arabinose binding protein-like 8096989 4000206 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType 1 solute binding protein-like 8096990 3000125 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BcNMP_bindinge6hbdB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: cNMP_bindingECOD (v294.1)
AcNMP_bindinge6hbdA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: cNMP_bindingECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (utative)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13407Periplasmic binding protein domain (Peripla_BP_4)Periplasmic binding protein domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ABC transporter periplasmic-binding protein YtfQ -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR025997Periplasmic binding proteinDomain
A, B
IPR028082Periplasmic binding protein-like IHomologous Superfamily