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 6H8L | pdb_00006h8l

Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyGlycoside hydrolase/deacetylase 8095523 3001025 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGlycoside hydrolase/deacetylase 8095523 3001025 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BV-sete6h8lB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: V-setECOD (v295.2)
AV-sete6h8lA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: V-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.370 Alpha Beta Alpha-Beta Barrel TIM Barrel Glycoside hydrolase/deacetylaseCATH (utative)
A3.20.20.370 Alpha Beta Alpha-Beta Barrel TIM Barrel Glycoside hydrolase/deacetylaseCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Peptidoglycan-N-acetylmuramic acid deacetylase PdaC

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelHomologous Superfamily
A, B
IPR037126PdaC/RsiV-like superfamilyHomologous Superfamily
A, B
IPR017219Peptidoglycan GlcNAc deacetylaseFamily
A, B
IPR050248Polysaccharide deacetylase, ArnD subfamilyFamily
A, B
IPR021729Domain of unknown function DUF3298Domain
A, B
IPR025303Deacetylase PdaCDomain
A, B
IPR002509NodB homology domainDomain