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254,186
Structures from the PDB archive
1,062,058
Computed Structure Models (CSM)
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6H56
|
pdb_00006h56
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Structure Factors (CIF)
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Data API
Effector domain of Pseudomonas aeruginosa VgrG2b
External Resource: Annotation
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
B
L_protein_N
e6h56B1
A: beta barrels
X: Family A G protein-coupled receptor-like
H: beta-sandwich domain in metalloprotease stcE
T: Restriction endonuclease-like
F: L_protein_N
ECOD (v294.2)
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
Effector domain of Pseudomonas aeruginosa VgrG2b
hydrolase activity
catalytic activity
cation binding
ion binding
binding
metal ion binding
small molecule binding
establishment of protein localization
transport
secretion
establishment of protein localization to extracellular region
export from cell
protein secretion
establishment of localization
protein localization to extracellular region
transmembrane transport
localization
secretion by cell
protein transmembrane transport
protein transport
protein secretion by the type VI secretion system
macromolecule localization
establishment of protein localization
transport
secretion
establishment of protein localization to extracellular region
export from cell
protein secretion
establishment of localization
protein localization to extracellular region
transmembrane transport
localization
secretion by cell
protein transmembrane transport
protein transport
protein secretion by the type VI secretion system
macromolecule localization
cellular process
intracellular protein localization
Less
cellular anatomical structure
extracellular region
type VI protein secretion system complex
protein-containing complex
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
IPR017847
Type VI secretion system, RhsGE-associated Vgr family subset
Family
A
,
B
IPR050708
Type VI secretion system VgrG/RHS
Family
A
,
B
IPR018769
Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345
Domain
A
,
B
IPR006531
Gp5/Type VI secretion system Vgr protein, OB-fold domain
Domain
A
,
B
IPR037026
Vgr protein, OB-fold domain superfamily
Homologous Superfamily
A
,
B
IPR006533
Type VI secretion system, RhsGE-associated Vgr protein
Family
A
,
B
IPR028244
Putative type VI secretion system, Rhs element associated Vgr domain
Domain
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