Annotations: 6H4K

Structure of the Usp25 C-terminal domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	TetR_N	e6h4kA1	A: alpha arrays	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TetR_N	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ubiquitin carboxyl-terminal hydrolase 25	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity ubiquitin-like protein peptidase activity deubiquitinase activity protein binding binding ubiquitin binding ubiquitin-like protein binding cysteine-type peptidase activity cysteine-type deubiquitinase activity SUMO binding ubiquitin protein ligase binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity ubiquitin-like protein peptidase activity deubiquitinase activity protein binding binding ubiquitin binding ubiquitin-like protein binding cysteine-type peptidase activity cysteine-type deubiquitinase activity SUMO binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding ATPase binding	cellular response to stimulus regulation of cellular process catabolic process response to stimulus regulation of cellular response to stress negative regulation of biological process negative regulation of ERAD pathway regulation of response to endoplasmic reticulum stress macromolecule catabolic process regulation of primary metabolic process negative regulation of protein catabolic process ERAD pathway cellular response to stress regulation of response to stress response to stress cellular response to stimulus regulation of cellular process catabolic process response to stimulus regulation of cellular response to stress negative regulation of biological process negative regulation of ERAD pathway regulation of response to endoplasmic reticulum stress macromolecule catabolic process regulation of primary metabolic process negative regulation of protein catabolic process ERAD pathway cellular response to stress regulation of response to stress response to stress negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process response to endoplasmic reticulum stress negative regulation of macromolecule metabolic process regulation of ERAD pathway negative regulation of response to endoplasmic reticulum stress negative regulation of catabolic process regulation of biological process negative regulation of response to stimulus regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process proteasomal protein catabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process regulation of response to stimulus negative regulation of proteasomal protein catabolic process response to chemical regulation of proteasomal protein catabolic process cellular process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process macromolecule modification protein modification process negative regulation of signaling signaling response to cytokine response to interleukin-17 regulation of signal transduction negative regulation of cell communication cytokine-mediated signaling pathway cell communication regulation of interleukin-17-mediated signaling pathway interleukin-17-mediated signaling pathway cellular response to cytokine stimulus signal transduction negative regulation of interleukin-17-mediated signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of cytokine-mediated signaling pathway cellular response to interleukin-17 negative regulation of signal transduction response to peptide regulation of response to cytokine stimulus negative regulation of response to cytokine stimulus negative regulation of cytokine-mediated signaling pathway regulation of cell communication protein deubiquitination protein K63-linked deubiquitination protein modification by small protein removal post-translational protein modification protein modification by small protein conjugation or removal response to oxidative stress regulation of response to oxidative stress negative regulation of response to oxidative stress regulation of protein stability regulation of biological quality protein K48-linked deubiquitination proteolysis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle endoplasmic reticulum endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR054108	Ubiquitin carboxyl-terminal hydrolase 25/28, UIM	Conserved Site
A	IPR018200	Ubiquitin specific protease, conserved site	Conserved Site
A	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A	IPR054109	UBA-like domain	Domain
A	IPR050164	Ubiquitin carboxyl-terminal hydrolases	Family
A	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Domain
A	IPR028889	Ubiquitin specific protease USP, catalytic domain	Domain
A	IPR003903	Ubiquitin interacting motif	Conserved Site
A	IPR009060	UBA-like superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q9UHP3	astrocytic tumor large cell medulloblastoma non-small cell lung carcinoma breast cancer lung carcinoma ovarian cancer invasive ductal breast carcinoma medulloblastoma spina bifida

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6H4K | pdb_00006h4k

Structure of the Usp25 C-terminal domain

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation