6H4C
A polyamorous repressor: deciphering the evolutionary strategy used by the phage-inducible chromosomal islands to spread in nature.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6h4ca_ | All beta proteins | beta-clip | dUTPase-like | automated matches | automated matches | Bacteriophage phi-11 (Dubowvirus dv11 ) [TaxId: 12360 ], | SCOPe (2.08) |
C | d6h4cc_ | All beta proteins | beta-clip | dUTPase-like | automated matches | automated matches | Bacteriophage phi-11 (Dubowvirus dv11 ) [TaxId: 12360 ], | SCOPe (2.08) |
E | d6h4ce_ | All beta proteins | beta-clip | dUTPase-like | automated matches | automated matches | Bacteriophage phi-11 (Dubowvirus dv11 ) [TaxId: 12360 ], | SCOPe (2.08) |
G | d6h4cg_ | All beta proteins | beta-clip | dUTPase-like | automated matches | automated matches | Bacteriophage phi-11 (Dubowvirus dv11 ) [TaxId: 12360 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | dUTPase-like | 8073096 | 3001957 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | dUTPase-like | 8073096 | 3001957 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | dUTPase-like | 8073096 | 3001957 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | dUTPase-like | 8073096 | 3001957 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | dUTPase | e6h4cA1 | A: beta barrels | X: beta-clip | H: dUTPase-like (From Topology) | T: dUTPase-like | F: dUTPase | ECOD (1.6) |
C | dUTPase | e6h4cC1 | A: beta barrels | X: beta-clip | H: dUTPase-like (From Topology) | T: dUTPase-like | F: dUTPase | ECOD (1.6) |
E | dUTPase | e6h4cE1 | A: beta barrels | X: beta-clip | H: dUTPase-like (From Topology) | T: dUTPase-like | F: dUTPase | ECOD (1.6) |
G | dUTPase | e6h4cG1 | A: beta barrels | X: beta-clip | H: dUTPase-like (From Topology) | T: dUTPase-like | F: dUTPase | ECOD (1.6) |
B | HTH_3_1 | e6h4cB2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_1 | ECOD (1.6) |
B | UNK_F_TYPE | e6h4cB1 | A: alpha complex topology | X: Stl repressor, middle domain (From Topology) | H: Stl repressor, middle domain (From Topology) | T: Stl repressor, middle domain | F: UNK_F_TYPE | ECOD (1.6) |
D | HTH_3_1 | e6h4cD3 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_1 | ECOD (1.6) |
D | UNK_F_TYPE | e6h4cD2 | A: alpha complex topology | X: Stl repressor, middle domain (From Topology) | H: Stl repressor, middle domain (From Topology) | T: Stl repressor, middle domain | F: UNK_F_TYPE | ECOD (1.6) |
F | HTH_3_1 | e6h4cF2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_1 | ECOD (1.6) |
F | UNK_F_TYPE | e6h4cF1 | A: alpha complex topology | X: Stl repressor, middle domain (From Topology) | H: Stl repressor, middle domain (From Topology) | T: Stl repressor, middle domain | F: UNK_F_TYPE | ECOD (1.6) |
H | HTH_3_1 | e6h4cH2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_1 | ECOD (1.6) |
H | UNK_F_TYPE | e6h4cH1 | A: alpha complex topology | X: Stl repressor, middle domain (From Topology) | H: Stl repressor, middle domain (From Topology) | T: Stl repressor, middle domain | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.40.10 | Mainly Beta | Distorted Sandwich | Deoxyuridine 5'-Triphosphate Nucleotidohydrolase | Chain A | CATH (utative) |
C | 2.70.40.10 | Mainly Beta | Distorted Sandwich | Deoxyuridine 5'-Triphosphate Nucleotidohydrolase | Chain A | CATH (utative) |
E | 2.70.40.10 | Mainly Beta | Distorted Sandwich | Deoxyuridine 5'-Triphosphate Nucleotidohydrolase | Chain A | CATH (utative) |
G | 2.70.40.10 | Mainly Beta | Distorted Sandwich | Deoxyuridine 5'-Triphosphate Nucleotidohydrolase | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00692 | dUTPase (dUTPase) | dUTPase | dUTPase hydrolyses dUTP to dUMP and pyrophosphate. | Domain | |
PF01381 | Helix-turn-helix (HTH_3) | Helix-turn-helix | This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008181 | Deoxyuridine triphosphate nucleotidohydrolase | Family | |
IPR033704 | dUTPase, trimeric | Domain | |
IPR029054 | dUTPase-like | Domain | |
IPR036157 | dUTPase-like superfamily | Homologous Superfamily | |
IPR001387 | Cro/C1-type helix-turn-helix domain | Domain | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |