6H3U
Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | d6h3uh_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
F [auth I] | d6h3ui_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B [auth L] | d6h3ul1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B [auth L] | d6h3ul2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
E [auth M] | d6h3um_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | V-set_8 | e6h3uH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
F [auth I] | V-set_8 | e6h3uI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B [auth L] | V-set | e6h3uL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
E [auth M] | V-set | e6h3uM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
C [auth A] | UNK_F_TYPE | e6h3uA1 | A: alpha complex topology | X: Head domain of SBV glycoprotein Gc (From Topology) | H: Head domain of SBV glycoprotein Gc (From Topology) | T: Head domain of SBV glycoprotein Gc | F: UNK_F_TYPE | ECOD (1.6) |
D [auth B] | UNK_F_TYPE | e6h3uB1 | A: alpha complex topology | X: Head domain of SBV glycoprotein Gc (From Topology) | H: Head domain of SBV glycoprotein Gc (From Topology) | T: Head domain of SBV glycoprotein Gc | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth M] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth H], F [auth I] | scFv 4B6 | VH | Mus musculus (house mouse) | IGHV3-2*02, IGHJ1*01, IGHJ1*02 | V-DOMAIN VH | IG | FV-HEAVY_KAPPA | IMGT (202436-0) |
B [auth L], E [auth M] | scFv 4B6 | V-KAPPA | Mus musculus (house mouse) | IGKV10-94*01, IGKJ1*01 | V-DOMAIN V-KAPPA | IG | FV-HEAVY_KAPPA | IMGT (202436-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H], F [auth I] | Heavy Chain | IGHV3 | - | envelopment polyprotein | SAbDab (2024-09-13) |
B [auth L], E [auth M] | Light Chain | IGKV10 | Kappa | envelopment polyprotein | SAbDab (2024-09-13) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR005167 | Bunyavirus glycoprotein G1 | Domain |
C [auth A], D [auth B] | IPR005168 | Bunyavirus glycoprotein G2 | Domain |
C [auth A], D [auth B] | IPR026400 | Bunyavirus nonstructural protein NSm | Domain |