6GY3 | pdb_00006gy3

Crystal Structure of C. glutamicum AmtR bound to glnA operator DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BTetR_Ne6gy3B2 A: alpha arraysX: HTHH: HTHT: tri-helicalF: TetR_NECOD (1.6)
BAmtR_Ce6gy3B1 A: alpha bundlesX: Tetracyclin repressor-like, C-terminal domain (From Topology)H: Tetracyclin repressor-like, C-terminal domain (From Topology)T: Tetracyclin repressor-like, C-terminal domainF: AmtR_CECOD (1.6)
ATetR_Ne6gy3A1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: TetR_NECOD (1.6)
AAmtR_Ce6gy3A2 A: alpha bundlesX: Tetracyclin repressor-like, C-terminal domain (From Topology)H: Tetracyclin repressor-like, C-terminal domain (From Topology)T: Tetracyclin repressor-like, C-terminal domainF: AmtR_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00440Bacterial regulatory proteins, tetR family (TetR_N)Bacterial regulatory proteins, tetR familyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*GP*TP*CP*TP*AP*TP*CP*GP*AP*TP*CP*TP*AP*TP*AP*GP*AP*C)-3')---
DNA (5'-D(*GP*TP*CP*TP*AP*TP*AP*GP*AP*TP*CP*GP*AP*TP*AP*GP*AP*C)-3')---
A, B
AmtR protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR009057Homedomain-like superfamilyHomologous Superfamily
A, B
IPR050109HTH-type, TetR-like transcriptional regulatorFamily
A, B
IPR001647DNA-binding HTH domain, TetR-typeDomain