6GWE | pdb_00006gwe

Crystal structure of Thrombin bound to P2 macrocycle

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth H]SCOP2B SuperfamilyTrypsin-like serine proteases 8042154 3000114 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTrypsin-like serine proteases 8042154 3000114 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth H]Copper-binde6gweH1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Hemagglutinin HA2 chainT: Hemagglutinin HA2 chainF: Copper-bindECOD (v294.1)
ACas9_PI2e6gweA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Cas9_PI2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth H]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (utative)
A2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth H]		PF00089Trypsin (Trypsin)TrypsinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth L],
D [auth B]		Thrombin light chain
A,
C [auth H]		Thrombin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth L],
D [auth B]		IPR018992Thrombin light chainDomain
B [auth L],
D [auth B]		IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
B [auth L],
D [auth B]		IPR003966Prothrombin/thrombinFamily
B [auth L],
D [auth B]		IPR018114Serine proteases, trypsin family, histidine active siteActive Site
B [auth L],
D [auth B]		IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth L],
D [auth B]		IPR033116Serine proteases, trypsin family, serine active siteActive Site
B [auth L],
D [auth B]		IPR001254Serine proteases, trypsin domainDomain
B [auth L],
D [auth B]		IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
B [auth L],
D [auth B]		IPR000001KringleDomain
B [auth L],
D [auth B]		IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
B [auth L],
D [auth B]		IPR051659Serine Protease S1 Domain-Containing ProteinFamily
B [auth L],
D [auth B]		IPR018056Kringle, conserved siteConserved Site
B [auth L],
D [auth B]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
B [auth L],
D [auth B]		IPR013806Kringle-like foldHomologous Superfamily
B [auth L],
D [auth B]		IPR038178Kringle superfamilyHomologous Superfamily
B [auth L],
D [auth B]		IPR001314Peptidase S1A, chymotrypsin familyFamily
A,
C [auth H]		IPR018992Thrombin light chainDomain
A,
C [auth H]		IPR037111Thrombin light chain domain superfamilyHomologous Superfamily
A,
C [auth H]		IPR003966Prothrombin/thrombinFamily
A,
C [auth H]		IPR018114Serine proteases, trypsin family, histidine active siteActive Site
A,
C [auth H]		IPR009003Peptidase S1, PA clanHomologous Superfamily
A,
C [auth H]		IPR033116Serine proteases, trypsin family, serine active siteActive Site
A,
C [auth H]		IPR001254Serine proteases, trypsin domainDomain
A,
C [auth H]		IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
A,
C [auth H]		IPR000001KringleDomain
A,
C [auth H]		IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
A,
C [auth H]		IPR051659Serine Protease S1 Domain-Containing ProteinFamily
A,
C [auth H]		IPR018056Kringle, conserved siteConserved Site
A,
C [auth H]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A,
C [auth H]		IPR013806Kringle-like foldHomologous Superfamily
A,
C [auth H]		IPR038178Kringle superfamilyHomologous Superfamily
A,
C [auth H]		IPR001314Peptidase S1A, chymotrypsin familyFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth L],
D [auth B]		Pharos:  P00734
A,
C [auth H]		Pharos:  P00734