6GVW
Crystal structure of the BRCA1-A complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F | F_UNCLASSIFIED | e6gvwF2 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF21125 | e6gvwF1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF21125 | ECOD (1.6) |
B | PF18110 | e6gvwB2 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: PF18110 | ECOD (1.6) |
B | PF01398 | e6gvwB1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
G | PF18110 | e6gvwG2 | A: alpha bundles | X: BRCC36 C-terminal helical domain (From Topology) | H: BRCC36 C-terminal helical domain (From Topology) | T: BRCC36 C-terminal helical domain | F: PF18110 | ECOD (1.6) |
G | PF01398 | e6gvwG1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
C | PF06113 | e6gvwC2 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: PF06113 | ECOD (1.6) |
H | PF06113 | e6gvwH2 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: PF06113 | ECOD (1.6) |
D | F_UNCLASSIFIED | e6gvwD1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
I | F_UNCLASSIFIED | e6gvwI1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21125 | BRCA1-A complex subunit Abraxas 1 MPN domain (MPN_2A_DUB_like) | BRCA1-A complex subunit Abraxas 1 MPN domain | This entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substra ... | Domain | |
PF18110 | BRCC36 C-terminal helical domain (BRCC36_C) | BRCC36 C-terminal helical domain | This is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling ... | Domain | |
PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | - | Family | |
PF06113 | Brain and reproductive organ-expressed protein (BRE) (BRE) | Brain and reproductive organ-expressed protein (BRE) | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023238 | FAM175 family | Family | |
IPR023239 | BRISC complex, Abraxas 1 subunit | Family | |
IPR037518 | MPN domain | Domain | |
IPR033860 | Brcc36 isopeptidase | Family | |
IPR037518 | MPN domain | Domain | |
IPR040749 | BRCC36, C-terminal helical domain | Domain | |
IPR000555 | JAB1/MPN/MOV34 metalloenzyme domain | Domain | |
IPR010358 | BRCA1-A complex subunit BRE | Family | |
IPR036465 | von Willebrand factor A-like domain superfamily | Homologous Superfamily | |
IPR026126 | BRISC and BRCA1-A complex member 1 | Family | |
IPR040714 | RAP80, N-terminal | Domain | |
IPR003903 | Ubiquitin interacting motif | Conserved Site | |
IPR006642 | Rad18, zinc finger UBZ4-type | Domain | |
IPR038868 | BRCA1-A complex subunit RAP80 | Family |