Annotations: 6GK2

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth H]	SCOP2B Superfamily	DEATH domain	8083260	3000069	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth F]	TGF_beta	e6gk2F1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: HTH	T: SH3	F: TGF_beta	ECOD (v294.1)
A [auth H]	TGF_beta	e6gk2H1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: HTH	T: SH3	F: TGF_beta	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth H]	PF00619	Caspase recruitment domain (CARD)	Caspase recruitment domain	Motif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (Pfam:PF00531) domain-like fold .	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth F]	Mucosa-associated lymphoid tissue lymphoma translocation protein 1	binding small molecule binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity identical protein binding protein binding cysteine-type peptidase activity cysteine-type endopeptidase activity enzyme binding protease binding aminoacyltransferase activity binding small molecule binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity identical protein binding protein binding cysteine-type peptidase activity cysteine-type endopeptidase activity enzyme binding protease binding aminoacyltransferase activity ubiquitin-like protein transferase activity acyltransferase activity transferase activity ubiquitin-protein transferase activity endopeptidase activator activity enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity endopeptidase regulator activity	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains multicellular organismal process regulation of immune effector process lymphocyte mediated immunity T cell mediated immunity positive regulation of leukocyte mediated immunity regulation of cellular process response to stimulus T cell cytokine production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of immune response cytokine production leukocyte mediated immunity adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains multicellular organismal process regulation of immune effector process lymphocyte mediated immunity T cell mediated immunity positive regulation of leukocyte mediated immunity regulation of cellular process response to stimulus T cell cytokine production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of immune response cytokine production leukocyte mediated immunity regulation of immune system process positive regulation of macromolecule metabolic process positive regulation of adaptive immune response positive regulation of T cell cytokine production positive regulation of immune system process regulation of T cell mediated immunity regulation of biological process regulation of cytokine production involved in immune response immune response regulation of adaptive immune response immune effector process regulation of gene expression regulation of leukocyte mediated immunity biosynthetic process regulation of response to stimulus positive regulation of production of molecular mediator of immune response positive regulation of multicellular organismal process regulation of immune response metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of production of molecular mediator of immune response positive regulation of cytokine production regulation of metabolic process positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of lymphocyte mediated immunity positive regulation of biological process positive regulation of response to stimulus regulation of T cell cytokine production regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of biosynthetic process regulation of cytokine production positive regulation of immune effector process regulation of multicellular organismal process cytokine production involved in immune response positive regulation of cellular process production of molecular mediator of immune response regulation of biosynthetic process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process adaptive immune response regulation of lymphocyte mediated immunity positive regulation of gene expression immune system process positive regulation of T cell mediated immunity positive regulation of cytokine production involved in immune response cellular process cellular response to stimulus immune response-regulating cell surface receptor signaling pathway signaling regulation of antigen receptor-mediated signaling pathway regulation of signal transduction cell communication immune response-activating signaling pathway immune response-regulating signaling pathway signal transduction regulation of signaling cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway regulation of T cell receptor signaling pathway T cell receptor signaling pathway regulation of cell communication antigen receptor-mediated signaling pathway activation of immune response B cell activation cell activation lymphocyte activation leukocyte activation biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus response to fungus regulation of apoptotic process apoptotic process regulation of programmed cell death cell death programmed cell death interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport establishment of localization localization intercellular transport establishment of localization in cell nuclear export cell population proliferation leukocyte proliferation mononuclear cell proliferation T cell activation lymphocyte proliferation T cell proliferation positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of signaling developmental process cellular developmental process hemopoiesis cell development mononuclear cell differentiation mature B cell differentiation lymphocyte differentiation B-1 B cell differentiation B cell differentiation cell differentiation anatomical structure development leukocyte differentiation negative regulation of programmed cell death negative regulation of biological process negative regulation of apoptotic process negative regulation of cellular process response to lipid cellular response to lipopolysaccharide lipopolysaccharide-mediated signaling pathway cellular response to biotic stimulus response to bacterium response to oxygen-containing compound cellular response to molecule of bacterial origin response to lipopolysaccharide cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to lipid response to molecule of bacterial origin regulation of protein modification process positive regulation of protein metabolic process regulation of protein ubiquitination positive regulation of post-translational protein modification regulation of primary metabolic process positive regulation of protein modification process protein ubiquitination protein metabolic process regulation of protein modification by small protein conjugation or removal protein modification process positive regulation of protein modification by small protein conjugation or removal positive regulation of protein ubiquitination regulation of post-translational protein modification regulation of protein metabolic process primary metabolic process macromolecule modification post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal regulation of interleukin-2 production interleukin-2 production positive regulation of interleukin-2 production proteolysis regulation of alpha-beta T cell activation regulation of leukocyte activation regulation of cell activation positive regulation of T cell differentiation regulation of cell development multicellular organism development regulation of T-helper cell differentiation alpha-beta T cell activation positive regulation of CD4-positive, alpha-beta T cell differentiation T-helper cell differentiation positive regulation of cell development regulation of leukocyte cell-cell adhesion T-helper 17 cell differentiation positive regulation of alpha-beta T cell differentiation regulation of developmental process positive regulation of leukocyte cell-cell adhesion CD4-positive, alpha-beta T cell differentiation positive regulation of T-helper 17 cell differentiation positive regulation of T-helper cell differentiation positive regulation of cell-cell adhesion regulation of T cell differentiation positive regulation of lymphocyte activation alpha-beta T cell differentiation T cell activation involved in immune response positive regulation of cell differentiation leukocyte activation involved in immune response regulation of cell-cell adhesion regulation of T-helper 17 cell differentiation regulation of cell adhesion positive regulation of T-helper 17 type immune response regulation of CD4-positive, alpha-beta T cell activation regulation of lymphocyte activation regulation of leukocyte differentiation regulation of cell differentiation cell activation involved in immune response positive regulation of developmental process positive regulation of cell activation positive regulation of leukocyte activation T cell differentiation positive regulation of T cell activation positive regulation of alpha-beta T cell activation regulation of CD4-positive, alpha-beta T cell differentiation regulation of alpha-beta T cell differentiation leukocyte cell-cell adhesion positive regulation of CD4-positive, alpha-beta T cell activation cell adhesion cell-cell adhesion alpha-beta T cell activation involved in immune response positive regulation of hemopoiesis CD4-positive, alpha-beta T cell activation lymphocyte activation involved in immune response regulation of lymphocyte differentiation regulation of multicellular organismal development regulation of T-helper 17 type immune response positive regulation of cell adhesion regulation of T cell activation T cell differentiation involved in immune response regulation of hemopoiesis positive regulation of leukocyte differentiation positive regulation of lymphocyte differentiation T-helper 17 type immune response	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm protein-containing complex polkadots CBM complex intracellular protein-containing complex membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm protein-containing complex polkadots CBM complex intracellular protein-containing complex membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen fibrillar center organelle membraneless organelle nuclear lumen
A [auth H]	B-cell lymphoma/leukemia 10	transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding binding DNA-binding transcription factor binding NF-kappaB binding protein kinase B binding kinase binding enzyme binding protein kinase binding protein-macromolecule adaptor activity molecular adaptor activity protein-containing complex binding ubiquitin protein ligase binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding binding DNA-binding transcription factor binding NF-kappaB binding protein kinase B binding kinase binding enzyme binding protein kinase binding protein-macromolecule adaptor activity molecular adaptor activity protein-containing complex binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding identical protein binding general transcription initiation factor binding signaling adaptor activity protease binding transcription coactivator activity transcription regulator activity transcription coregulator activity CARD domain binding protein domain specific binding	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity response to stimulus immune response immune system process B cell mediated immunity leukocyte mediated immunity immunoglobulin mediated immune response adaptive immune response immune effector process multicellular organismal process regulation of cellular process regulation of B cell apoptotic process homeostatic process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity response to stimulus immune response immune system process B cell mediated immunity leukocyte mediated immunity immunoglobulin mediated immune response adaptive immune response immune effector process multicellular organismal process regulation of cellular process regulation of B cell apoptotic process homeostatic process leukocyte apoptotic process negative regulation of biological process regulation of programmed cell death lymphocyte apoptotic process negative regulation of leukocyte apoptotic process negative regulation of mature B cell apoptotic process negative regulation of cellular process regulation of immune system process regulation of leukocyte apoptotic process regulation of lymphocyte apoptotic process regulation of biological process mature B cell apoptotic process negative regulation of programmed cell death regulation of apoptotic process biological regulation B cell apoptotic process cell death negative regulation of B cell apoptotic process B cell homeostasis negative regulation of apoptotic process multicellular organismal-level homeostasis leukocyte homeostasis homeostasis of number of cells cellular process regulation of mature B cell apoptotic process lymphocyte homeostasis apoptotic process programmed cell death negative regulation of lymphocyte apoptotic process positive regulation of programmed cell death positive regulation of biological process positive regulation of apoptotic process positive regulation of cellular process biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus cellular response to stimulus signaling non-canonical NF-kappaB signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction embryonic epithelial tube formation chordate embryonic development tube formation embryo development multicellular organism development epithelial tube formation tube morphogenesis primary neural tube formation embryo development ending in birth or egg hatching anatomical structure development epithelial tube morphogenesis system development developmental process morphogenesis of embryonic epithelium epithelium development neural tube development tube development embryonic morphogenesis morphogenesis of an epithelium nervous system development tissue development anatomical structure morphogenesis tissue morphogenesis neural tube closure neural tube formation anatomical structure formation involved in morphogenesis tube closure positive regulation of interleukin-8 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process regulation of biosynthetic process interleukin-8 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of multicellular organismal process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process regulation of interleukin-8 production positive regulation of cell communication immune response-regulating cell surface receptor signaling pathway positive regulation of signal transduction positive regulation of T cell receptor signaling pathway regulation of antigen receptor-mediated signaling pathway regulation of signal transduction positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response positive regulation of immune system process regulation of signaling cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway regulation of T cell receptor signaling pathway T cell receptor signaling pathway regulation of response to stimulus regulation of immune response regulation of cell communication antigen receptor-mediated signaling pathway activation of immune response positive regulation of antigen receptor-mediated signaling pathway positive regulation of signaling antifungal innate immune response defense response to fungus response to fungus quinolinate metabolic process oxoacid metabolic process small molecule biosynthetic process dicarboxylic acid metabolic process pyridine-containing compound biosynthetic process carboxylic acid metabolic process organic acid metabolic process organic acid biosynthetic process carboxylic acid biosynthetic process quinolinate biosynthetic process pyridine-containing compound metabolic process small molecule metabolic process dicarboxylic acid biosynthetic process regulation of immune effector process positive regulation of myeloid leukocyte cytokine production involved in immune response mast cell cytokine production positive regulation of immune effector process myeloid leukocyte cytokine production cytokine production involved in immune response production of molecular mediator of immune response regulation of cytokine production involved in immune response regulation of mast cell cytokine production positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response regulation of production of molecular mediator of immune response positive regulation of mast cell cytokine production cellular defense response positive regulation of canonical NF-kappaB signal transduction regulation of intracellular signal transduction positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction T cell apoptotic process interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production response to lipid cellular response to lipopolysaccharide lipopolysaccharide-mediated signaling pathway cellular response to biotic stimulus response to bacterium response to oxygen-containing compound cellular response to molecule of bacterial origin response to lipopolysaccharide cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to lipid response to molecule of bacterial origin regulation of protein modification process positive regulation of protein metabolic process regulation of protein ubiquitination positive regulation of post-translational protein modification regulation of primary metabolic process positive regulation of protein modification process protein ubiquitination protein metabolic process regulation of protein modification by small protein conjugation or removal protein modification process positive regulation of protein modification by small protein conjugation or removal positive regulation of protein ubiquitination regulation of post-translational protein modification regulation of protein metabolic process primary metabolic process macromolecule modification post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of extrinsic apoptotic signaling pathway regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway regulation of apoptotic signaling pathway response to mechanical stimulus response to abiotic stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus positive regulation of tumor necrosis factor superfamily cytokine production regulation of lymphotoxin A production lymphotoxin A production tumor necrosis factor superfamily cytokine production positive regulation of lymphotoxin A production regulation of tumor necrosis factor superfamily cytokine production positive regulation of DNA-templated transcription RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription positive regulation of phosphorylation positive regulation of phosphorus metabolic process phosphorylation positive regulation of phosphate metabolic process phosphate-containing compound metabolic process regulation of phosphorus metabolic process regulation of phosphorylation phosphorus metabolic process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis regulation of leukocyte activation regulation of cell activation positive regulation of leukocyte cell-cell adhesion lymphocyte activation leukocyte cell-cell adhesion leukocyte activation positive regulation of cell-cell adhesion positive regulation of lymphocyte activation positive regulation of cell activation cell adhesion cell-cell adhesion T cell activation positive regulation of leukocyte activation regulation of cell-cell adhesion positive regulation of T cell activation positive regulation of cell adhesion regulation of cell adhesion cell activation regulation of T cell activation regulation of leukocyte cell-cell adhesion regulation of lymphocyte activation regulation of defense response positive regulation of response to biotic stimulus regulation of response to biotic stimulus pattern recognition receptor signaling pathway regulation of response to external stimulus toll-like receptor signaling pathway positive regulation of response to external stimulus regulation of response to stress innate immune response-activating signaling pathway positive regulation of innate immune response regulation of innate immune response positive regulation of defense response activation of innate immune response response to nutrient levels response to food	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm protein-containing complex polkadots CBM complex intracellular protein-containing complex membrane microdomain membrane raft membrane membrane-bounded organelle nucleus cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm protein-containing complex polkadots CBM complex intracellular protein-containing complex membrane microdomain membrane raft membrane membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen lytic vacuole vacuole lysosome cell periphery immunological synapse plasma membrane polymeric cytoskeletal fiber intracellular membraneless organelle cytoplasmic microtubule cytoskeleton membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth F]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth F]	IPR003599	Immunoglobulin domain subtype	Domain
B [auth F]	IPR037940	MALT1, death domain	Domain
B [auth F]	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
B [auth F]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth F]	IPR007110	Immunoglobulin-like domain	Domain
B [auth F]	IPR041077	MALT1 immunoglobulin-like domain	Domain
B [auth F]	IPR052039	Caspase-related proteases and regulators	Family
B [auth F]	IPR001309	Peptidase C14, p20 domain	Domain
B [auth F]	IPR003598	Immunoglobulin subtype 2	Domain
B [auth F]	IPR011600	Peptidase C14, caspase domain	Domain
B [auth F]	IPR033540	MALT1, immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth F]	IPR011029	Death-like domain superfamily	Homologous Superfamily
A [auth H]	IPR042143	BCL10, CARD domain	Domain
A [auth H]	IPR011029	Death-like domain superfamily	Homologous Superfamily
A [auth H]	IPR033238	B-cell lymphoma/leukemia 10/E10	Family
A [auth H]	IPR001315	CARD domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth F]	Pharos: Q9UDY8	combined immunodeficiency due to MALT1 deficiency diffuse large B-cell lymphoma MALT lymphoma Nasal discharge primitive neuroectodermal tumor subependymal giant cell astrocytoma allergic rhinitis atypical teratoid rhabdoid tumor familial dermatographia lung cancer malignant glioma medulloblastoma osteosarcoma psoriasis urticaria combined immunodeficiency due to MALT1 deficiency diffuse large B-cell lymphoma MALT lymphoma Nasal discharge primitive neuroectodermal tumor subependymal giant cell astrocytoma allergic rhinitis atypical teratoid rhabdoid tumor familial dermatographia lung cancer malignant glioma medulloblastoma osteosarcoma psoriasis urticaria angioedema gastric carcinoma glioblastoma lymphoma ovarian cancer atopic conjunctivitis Gaucher disease malignant ependymoma marginal zone lymphoma
A [auth H]	Pharos: O95999	MALT lymphoma immunodeficiency 37 testicular germ cell tumor malignant mesothelioma follicular lymphoma Lymphoma, Mixed-Cell lymphosarcoma malignant pancreatic neoplasm acute T cell leukemia non-Hodgkin lymphoma colorectal cancer pancreatic intraductal papillary-mucinous carcinoma testicular cancer lung cancer astrocytic tumor MALT lymphoma immunodeficiency 37 testicular germ cell tumor malignant mesothelioma follicular lymphoma Lymphoma, Mixed-Cell lymphosarcoma malignant pancreatic neoplasm acute T cell leukemia non-Hodgkin lymphoma colorectal cancer pancreatic intraductal papillary-mucinous carcinoma testicular cancer lung cancer astrocytic tumor oligodendroglioma dermatomyositis pancreatic intraductal papillary-mucinous neoplasm reticulum cell sarcoma lymphoma, non-Hodgkin, familial marginal zone lymphoma cancer pancreatic ductal adenocarcinoma diabetes mellitus follicular lymphoma, susceptibility to, 1 teratoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.