6GIY

The baseplate complex from the type VI secretion system


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPF05936e6giyD1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
DPF05936e6giyD2 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)
EPF05936e6giyE2 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
EPF05936e6giyE1 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)
FPF05936e6giyF1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
FPF05936e6giyF2 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)
GPF05936e6giyG2 A: beta sandwichesX: jelly-rollH: TssK C-terminal domain (From Topology)T: TssK C-terminal domainF: PF05936ECOD (1.6)
GPF05936e6giyG3 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
GPF05936e6giyG1 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)
HPF05936e6giyH1 A: beta sandwichesX: jelly-rollH: TssK C-terminal domain (From Topology)T: TssK C-terminal domainF: PF05936ECOD (1.6)
HPF05936e6giyH2 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
HPF05936e6giyH3 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)
IPF05936e6giyI1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF05936ECOD (1.6)
IPF05936e6giyI2 A: alpha arraysX: L-aspartase middle domain-likeH: TssK neck domain (From Topology)T: TssK neck domainF: PF05936ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF05947Type VI secretion system, TssF (T6SS_TssF)Type VI secretion system, TssF- Family
PF06996Type VI secretion, TssG (T6SS_TssG)Type VI secretion, TssG- Family
D, E, F, G, H
PF05936Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE (T6SS_VasE)Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE- Family

InterPro: Protein Family Classification InterPro Database Homepage