6FRK | pdb_00006frk

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
FB [auth z]	SCOP2B Superfamily	Signal recognition particle alu RNA binding heterodimer, SRP9/14	8077811	3000976	SCOP2B (2022-06-29)
BB [auth v]	SCOP2 Family	Ras-like monodomain GTPases	8097819	4004043	SCOP2 (2022-06-29)
BB [auth v]	SCOP2 Superfamily	Ras-like P-loop GTPases	8097820	3002022	SCOP2 (2022-06-29)
AB [auth u]	SCOP2B Superfamily	TPR-like	8053750	3001345	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth 3]	V-set	e6frk31	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
D [auth 4]	V-set	e6frk41	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
F [auth 6]	V-set	e6frk61	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
I [auth A]	V-set	e6frkA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
K [auth C]	Ald_deCOase	e6frkC1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: Ald_deCOase	ECOD (v294.1)
P [auth H]	V-set	e6frkH1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
R [auth J]	V-set	e6frkJ1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
U [auth N]	V-set	e6frkN1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
W [auth P]	V-set	e6frkP1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
Y [auth R]	V-set	e6frkR1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
AA [auth T]	V-set	e6frkT1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
DA [auth W]	V-set	e6frkW1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
HA [auth a]	V-set	e6frka1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
JA [auth c]	V-set	e6frkc1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
KA [auth d]	V-set	e6frkd1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
MA [auth f]	V-set	e6frkf1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
NA [auth g]	V-set	e6frkg1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
PA [auth i]	V-set	e6frki1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
QA [auth j]	V-set	e6frkj1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
SA [auth l]	V-set	e6frkl1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
TA [auth m]	V-set	e6frkm1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
WA [auth p]	V-set	e6frkp1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
XA [auth q]	V-set	e6frkq1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
CB [auth w]	V-set	e6frkw1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
EB [auth y]	V-set	e6frky1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
FB [auth z]	V-set	e6frkz1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
DB [auth x]	V-set	e6frkx1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
BB [auth v]	V-set	e6frkv1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
AB [auth u]	V-set	e6frku1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
VA [auth o]	V-set	e6frko1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
UA [auth n]	V-set	e6frkn1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
RA [auth k]	V-set	e6frkk1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
OA [auth h]	V-set	e6frkh1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
LA [auth e]	V-set	e6frke1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
IA [auth b]	V-set	e6frkb1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
GA [auth Z]	V-set	e6frkZ1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
FA [auth Y]	V-set	e6frkY1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
EA [auth X]	V-set	e6frkX1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
CA [auth V]	V-set	e6frkV1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
BA [auth U]	V-set	e6frkU1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
Z [auth S]	V-set	e6frkS1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
X [auth Q]	V-set	e6frkQ1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
V [auth O]	V-set	e6frkO1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
T [auth M]	V-set	e6frkM1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
S [auth L]	V-set	e6frkL1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
Q [auth I]	V-set	e6frkI1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
O [auth G]	V-set	e6frkG1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
N [auth F]	V-set	e6frkF1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
M [auth E]	V-set	e6frkE1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
L [auth D]	V-set	e6frkD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
J [auth B]	V-set	e6frkB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
Y [auth R]	PF17004	Putative TPR-like repeat (SRP_TPR_like)	Putative TPR-like repeat	-	Repeat
DA [auth W]	PF05486	Signal recognition particle 9 kDa protein (SRP9) (SRP9-21)	Signal recognition particle 9 kDa protein (SRP9)	This family consists of several eukaryotic SRP9 proteins. SRP9 together with the Alu-homologous region of 7SL RNA and SRP14 comprise the "Alu domain" of SRP, which mediates pausing of synthesis of ribosome associated nascent polypeptides that have be ...	This family consists of several eukaryotic SRP9 proteins. SRP9 together with the Alu-homologous region of 7SL RNA and SRP14 comprise the "Alu domain" of SRP, which mediates pausing of synthesis of ribosome associated nascent polypeptides that have been engaged by the targeting domain of SRP [1]. This family also contains the homologous fungal SRP21 [2].	Domain
GA [auth Z]	PF02290	Signal recognition particle 14kD protein (SRP14)	Signal recognition particle 14kD protein	The signal recognition particle (SRP) is a multimeric protein involved in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP14 and SRP9 form a complex essential for SRP RNA binding.	Domain
FA [auth Y]	PF04086	Signal recognition particle, alpha subunit, N-terminal (SRP-alpha_N)	Signal recognition particle, alpha subunit, N-terminal	-	Family
EA [auth X]	PF00448	SRP54-type protein, GTPase domain (SRP54)	SRP54-type protein, GTPase domain	This family includes relatives of the G-domain of the SRP54 family of proteins.	Domain
BA [auth U]	PF16969	RNA-binding signal recognition particle 68 (SRP68)	RNA-binding signal recognition particle 68	-	Family
X [auth Q]	PF01922	SRP19 protein (SRP19)	SRP19 protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth 2]	tRNA	-	-	-
C [auth 3]	Ribosomal protein eL28	-	-	-
D [auth 4]	Ribosomal protein L12	-	-	-
F [auth 6]	60S acidic ribosomal protein P0	-	-	-
H [auth 8]	5.8S ribosomal RNA	-	-	-
I [auth A]	Ribosomal protein L8	-	-	-
K [auth C]	Ribosomal protein uL4	-	-	-
P [auth H]	Ribosomal protein uL6	-	-	-
R [auth J]	Ribosomal protein uL5	-	-	-
U [auth N]	Ribosomal protein L15	-	-	-
W [auth P]	Ribosomal protein uL22	-	-	-
Y [auth R]	Ribosomal protein eL19	-	-	-
AA [auth T]	Ribosomal protein eL21	-	-	-
DA [auth W]	Ribosomal protein eL24	-	-	-
HA [auth a]	Ribosomal protein uL15	-	-	-
JA [auth c]	Ribosomal protein eL30	-	-	-
KA [auth d]	Ribosomal protein eL31	-	-	-
MA [auth f]	Ribosomal protein eL33	-	-	-
NA [auth g]	Ribosomal protein eL34	-	-	-
PA [auth i]	Ribosomal protein eL36	-	-	-
QA [auth j]	Ribosomal protein L37	-	-	-
SA [auth l]	Ribosomal protein eL39	-	-	-
TA [auth m]	Ribosomal protein eL40	-	-	-
WA [auth p]	Ribosomal protein eL43	-	-	-
XA [auth q]	Signal recognition particle subunit SRP19	RNA binding 7S RNA binding binding nucleic acid binding	establishment of protein localization cellular localization SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition protein-containing complex organization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane cellular component organization cellular component biogenesis localization cellular component assembly SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle establishment of protein localization cellular localization SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition protein-containing complex organization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane cellular component organization cellular component biogenesis localization cellular component assembly SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle protein-containing complex assembly cotranslational protein targeting to membrane cellular process cellular component organization or biogenesis establishment of protein localization to endoplasmic reticulum protein targeting to ER	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex cytoplasm nucleoplasm
YA [auth r]	Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72	ribonucleoprotein complex binding protein-containing complex binding binding signal recognition particle binding RNA binding 7S RNA binding nucleic acid binding TPR domain binding protein binding protein domain specific binding ribosome binding	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
CB [auth w]	Signal recognition particle 9 kDa protein	RNA binding 7S RNA binding binding nucleic acid binding	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of translational elongation negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of translational elongation negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of translational elongation regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process translational elongation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex
EB [auth y]	SRP receptor alpha subunit	ribonucleoprotein complex binding protein-containing complex binding binding signal recognition particle binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding ribonucleoprotein complex binding protein-containing complex binding binding signal recognition particle binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular localization establishment of protein localization transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport establishment of protein localization to membrane protein targeting cellular localization establishment of protein localization transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport establishment of protein localization to membrane protein targeting localization within membrane protein targeting to membrane SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane establishment of protein localization to endoplasmic reticulum protein targeting to ER	membrane-bounded organelle protein-containing complex intracellular anatomical structure organelle subcompartment membrane membrane protein complex intracellular membrane-bounded organelle endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle rough endoplasmic reticulum membrane membrane-bounded organelle protein-containing complex intracellular anatomical structure organelle subcompartment membrane membrane protein complex intracellular membrane-bounded organelle endomembrane system rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle rough endoplasmic reticulum membrane organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum signal recognition particle receptor complex cytoplasm organelle membrane endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane
G [auth 7]	5S ribosomal RNA	-	-	-
FB [auth z]	Signal recognition particle 14 kDa protein	endoplasmic reticulum signal peptide binding signal sequence binding binding peptide binding RNA binding 7S RNA binding nucleic acid binding	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex
DB [auth x]	Signal recognition particle 54 kDa protein	endoplasmic reticulum signal peptide binding signal sequence binding binding peptide binding ribonucleoprotein complex binding protein-containing complex binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding endoplasmic reticulum signal peptide binding signal sequence binding binding peptide binding ribonucleoprotein complex binding protein-containing complex binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding GDP binding RNA binding 7S RNA binding nucleic acid binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cell chemotaxis cellular response to stimulus chemotaxis response to stimulus neutrophil chemotaxis response to external stimulus neutrophil migration granulocyte migration leukocyte migration cellular response to chemical stimulus taxis immune system process granulocyte chemotaxis response to chemical myeloid leukocyte migration cell chemotaxis cellular response to stimulus chemotaxis response to stimulus neutrophil chemotaxis response to external stimulus neutrophil migration granulocyte migration leukocyte migration cellular response to chemical stimulus taxis immune system process granulocyte chemotaxis response to chemical myeloid leukocyte migration cell migration cellular process cell motility leukocyte chemotaxis locomotion developmental process myeloid leukocyte differentiation cellular developmental process hemopoiesis cell development granulocyte differentiation myeloid cell differentiation cell differentiation anatomical structure development leukocyte differentiation localization establishment of protein localization establishment of protein localization to organelle protein targeting establishment of localization establishment of protein localization to endoplasmic reticulum protein targeting to ER cellular localization SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition protein-containing complex organization establishment of protein localization to membrane localization within membrane protein targeting to membrane cellular component organization cellular component biogenesis cellular component assembly SRP-dependent cotranslational protein targeting to membrane protein-containing complex assembly cotranslational protein targeting to membrane cellular component organization or biogenesis multicellular organismal process digestive system development gland development animal organ development exocrine pancreas development multicellular organism development pancreas development exocrine system development system development transport protein transmembrane transport establishment of localization in cell intracellular protein localization intracellular protein transmembrane transport intracellular transport transmembrane transport protein transport macromolecule localization SRP-dependent cotranslational protein targeting to membrane, translocation intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytoplasm cytosol signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex endoplasmic reticulum endomembrane system
BB [auth v]	SRP receptor beta subunit	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	Golgi to plasma membrane transport establishment of protein localization cellular localization protein localization to cell periphery post-Golgi vesicle-mediated transport transport establishment of protein localization to membrane protein localization to plasma membrane establishment of protein localization to plasma membrane Golgi to plasma membrane protein transport localization within membrane protein localization to membrane establishment of localization vesicle-mediated transport vesicle-mediated transport to the plasma membrane Golgi to plasma membrane transport establishment of protein localization cellular localization protein localization to cell periphery post-Golgi vesicle-mediated transport transport establishment of protein localization to membrane protein localization to plasma membrane establishment of protein localization to plasma membrane Golgi to plasma membrane protein transport localization within membrane protein localization to membrane establishment of localization vesicle-mediated transport vesicle-mediated transport to the plasma membrane localization protein transport macromolecule localization cellular process intracellular protein localization Golgi vesicle transport intracellular transport establishment of localization in cell intracellular protein transport protein localization to Golgi apparatus protein localization to organelle	polymeric cytoskeletal fiber intracellular anatomical structure intracellular membraneless organelle cytoplasmic microtubule intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm supramolecular fiber microtubule supramolecular polymer supramolecular complex polymeric cytoskeletal fiber intracellular anatomical structure intracellular membraneless organelle cytoplasmic microtubule intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton membrane-bounded organelle Golgi apparatus intracellular membrane-bounded organelle endomembrane system organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane
AB [auth u]	Signal recognition particle subunit SRP68	endoplasmic reticulum signal peptide binding signal sequence binding binding peptide binding ribonucleoprotein complex binding protein-containing complex binding signal recognition particle binding RNA binding 7S RNA binding nucleic acid binding	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle nuclear lumen signal recognition particle protein-containing complex signal recognition particle, endoplasmic reticulum targeting ribonucleoprotein complex endoplasmic reticulum endomembrane system
ZA [auth t]	Signal sequence	-	-	-
E [auth 5]	28S ribosomal RNA	-	-	-
VA [auth o]	Ribosomal protein eL42	-	-	-
UA [auth n]	Ribosomal protein eL41	-	-	-
RA [auth k]	Ribosomal protein eL38	-	-	-
OA [auth h]	Ribosomal protein uL29	-	-	-
LA [auth e]	Ribosomal protein eL32	-	-	-
IA [auth b]	60S ribosomal protein L29	-	-	-
GA [auth Z]	60S ribosomal protein L27	-	-	-
FA [auth Y]	Ribosomal protein uL24	-	-	-
EA [auth X]	Ribosomal protein uL23	-	-	-
CA [auth V]	Ribosomal protein L23	-	-	-
BA [auth U]	Ribosomal protein eL22	-	-	-
Z [auth S]	Ribosomal protein eL20	-	-	-
X [auth Q]	Ribosomal protein eL18	-	-	-
V [auth O]	Ribosomal protein uL13	-	-	-
T [auth M]	Ribosomal protein eL14	-	-	-
S [auth L]	Ribosomal protein eL13	-	-	-
Q [auth I]	Ribosomal protein uL16	-	-	-
O [auth G]	Ribosomal protein eL8	-	-	-
N [auth F]	Ribosomal protein uL30	-	-	-
M [auth E]	Ribosomal protein eL6	-	-	-
L [auth D]	Ribosomal protein uL18	-	-	-
J [auth B]	Ribosomal protein uL3	-	-	-
A [auth 1]	Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
XA [auth q]	IPR002778	Signal recognition particle, SRP19 subunit	Family
XA [auth q]	IPR036521	Signal recognition particle, subunit SRP19-like superfamily	Homologous Superfamily
YA [auth r]	IPR013699	Signal recognition particle, SRP72 subunit, RNA-binding	Domain
YA [auth r]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
YA [auth r]	IPR031545	Signal recognition particle subunit SRP72, TPR-like repeat	Repeat
YA [auth r]	IPR026270	Signal recognition particle, SRP72 subunit	Family
YA [auth r]	IPR019734	Tetratricopeptide repeat	Repeat
CB [auth w]	IPR008832	Signal recognition particle SRP9	Family
CB [auth w]	IPR009018	Signal recognition particle, SRP9/SRP14 subunit	Homologous Superfamily
CB [auth w]	IPR039432	SRP9 domain	Domain
CB [auth w]	IPR039914	Signal recognition particle SRP9-like	Family
EB [auth y]	IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	Domain
EB [auth y]	IPR036225	SRP/SRP receptor, N-terminal	Homologous Superfamily
EB [auth y]	IPR011012	Longin-like domain superfamily	Homologous Superfamily
EB [auth y]	IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	Homologous Superfamily
EB [auth y]	IPR003593	AAA+ ATPase domain	Domain
EB [auth y]	IPR007222	Signal recognition particle receptor, alpha subunit, N-terminal	Domain
EB [auth y]	IPR013822	Signal recognition particle SRP54, helical bundle	Domain
EB [auth y]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
FB [auth z]	IPR003210	Signal recognition particle, SRP14 subunit	Family
FB [auth z]	IPR009018	Signal recognition particle, SRP9/SRP14 subunit	Homologous Superfamily
DB [auth x]	IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	Domain
DB [auth x]	IPR004125	Signal recognition particle, SRP54 subunit, M-domain	Domain
DB [auth x]	IPR003593	AAA+ ATPase domain	Domain
DB [auth x]	IPR013822	Signal recognition particle SRP54, helical bundle	Domain
DB [auth x]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
DB [auth x]	IPR022941	Signal recognition particle, SRP54 subunit	Family
DB [auth x]	IPR036225	SRP/SRP receptor, N-terminal	Homologous Superfamily
DB [auth x]	IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	Homologous Superfamily
DB [auth x]	IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic	Family
DB [auth x]	IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	Homologous Superfamily
BB [auth v]	IPR024156	Small GTPase superfamily, ARF type	Family
BB [auth v]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
BB [auth v]	IPR019009	Signal recognition particle receptor, beta subunit	Family
AB [auth u]	IPR026258	Signal recognition particle subunit SRP68	Family
AB [auth u]	IPR038253	SRP68, N-terminal domain superfamily	Homologous Superfamily
AB [auth u]	IPR034652	Signal recognition particle subunit SRP68, RNA-binding domain	Domain