6FE8 | pdb_00006fe8

Cryo-EM structure of the core Centromere Binding Factor 3 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilySkp1 dimerisation domain-like 8043773 3000564 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCep3/Upc2 domain-like 8093129 3002679 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyARM repeat-like 8093131 3000116 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyARM repeat-like 8093131 3000116 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCep3/Upc2 domain-like 8093129 3002679 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CWD40, Beta-prop_NOL10_Ne6fe8C1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: WD40, Beta-prop_NOL10_NECOD (v294.1)
BAnoctamine6fe8B1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
AWD40, Beta-prop_NOL10_Ne6fe8A1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: WD40, Beta-prop_NOL10_NECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1 Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain
PF01466Skp1 family, dimerisation domain (Skp1)Skp1 family, dimerisation domainDomain
A, B
PF16846Centromere DNA-binding protein complex CBF3 subunit B (Cep3)Centromere DNA-binding protein complex CBF3 subunit B- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Centromere DNA-binding protein complex CBF3 subunit C
Suppressor of kinetochore protein 1
A, B
Centromere DNA-binding protein complex CBF3 subunit B