6FDB | pdb_00006fdb

Positively supercharged variant of the computationally designed cage protein O3-33


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HAnoctamine6fdbH1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
GAnoctamine6fdbG1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
FAnoctamine6fdbF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
EAnoctamine6fdbE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
DAnoctamine6fdbD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
CAnoctamine6fdbC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
BAnoctamine6fdbB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
AMur_ligase_Me6fdbA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: Mur_ligase_MECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Propanediol utilization protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011238Bacterial microcompartment shell protein PduTFamily
A, B, C, D, E
IPR000249Bacterial microcompartment domainDomain
A, B, C, D, E
IPR050575Bacterial microcompartment shellFamily
A, B, C, D, E
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
A, B, C, D, E
IPR037233CcmK-like superfamilyHomologous Superfamily