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 6FB2 | pdb_00006fb2

Crystal Structure of a Tailored I-CreI Homing Endonuclease Protein (3115 variant) in complex with its target DNA (Haemoglobin beta subunit gene) in the presence of Manganese

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyHoming endonucleases 8032709 3000266 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHoming endonucleases 8032709 3000266 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BOB_NTP_binde6fb2B1 A: alpha arraysX: L-aspartase middle domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: OB_NTP_bindECOD (v295.2)
AOB_NTP_binde6fb2A1 A: alpha arraysX: L-aspartase middle domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: OB_NTP_bindECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth G]DNA (5'-D(P*AP*GP*AP*AP*GP*TP*CP*TP*GP*A)-3')---
DNA (5'-D(P*AP*GP*GP*AP*GP*TP*CP*AP*GP*A)-3')---
D [auth F]DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*CP*CP*TP*GP*TP*GP*G)-3')---
C [auth D]DNA (5'-D(*TP*CP*AP*GP*AP*CP*TP*TP*CP*TP*CP*CP*AP*C)-3')---
DNA endonuclease I-CreI -
DNA endonuclease I-CreI -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR004860Homing endonuclease, LAGLIDADG domainDomain
IPR027434Homing endonucleaseHomologous Superfamily
IPR004860Homing endonuclease, LAGLIDADG domainDomain
IPR027434Homing endonucleaseHomologous Superfamily