6F3A | pdb_00006f3a

Cryo-EM structure of a single dynein tail domain bound to dynactin and BICD2N

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
K	SCOP2B Superfamily	Subunits of heterodimeric actin filament capping protein Capz	8077311	3001499	SCOP2B (2022-06-29)
GA [auth l]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8033463	3001810	SCOP2B (2022-06-29)
FA [auth k]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8033463	3001810	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	UQ_con	e6f3aH1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
J	UQ_con	e6f3aJ1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
S [auth U]	UQ_con	e6f3aU1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
T [auth V]	UQ_con	e6f3aV1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
BA [auth f]	Herpes_MCP	e6f3af1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Herpes_MCP	ECOD (v294.1)
DA [auth h]	UQ_con	e6f3ah1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
L	UQ_con	e6f3aL1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
K	UQ_con	e6f3aK1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
GA [auth l]	UQ_con	e6f3al1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
FA [auth k]	UQ_con	e6f3ak1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
I	UQ_con	e6f3aI1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
G	UQ_con	e6f3aG1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
F	UQ_con	e6f3aF1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
E	UQ_con	e6f3aE1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
D	UQ_con	e6f3aD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
C	UQ_con	e6f3aC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
B	UQ_con	e6f3aB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)
A	UQ_con	e6f3aA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: UQ_con	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
L	PF03259	Roadblock/LC7 domain (Robl_LC7)	Roadblock/LC7 domain	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	Domain
L	PF01115	F-actin capping protein, beta subunit (F_actin_cap_B)	F-actin capping protein, beta subunit	-	Family
K	PF01267	F-actin capping protein alpha subunit (F-actin_cap_A)	F-actin capping protein alpha subunit	-	Family
K	PF03259	Roadblock/LC7 domain (Robl_LC7)	Roadblock/LC7 domain	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	Domain
A, B, C, D, E A, B, C, D, E, F, G, I	PF08385	Dynein heavy chain, N-terminal region 1 (DHC_N1)	Dynein heavy chain, N-terminal region 1	-	Family
A, B, C, D, E A, B, C, D, E, F, G, I	PF00022	Actin (Actin)	Actin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
H	Actin, cytoplasmic 1	structural constituent of postsynapse structural constituent of cytoskeleton structural molecule activity structural constituent of synapse structural constituent of postsynaptic actin cytoskeleton binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding structural constituent of postsynapse structural constituent of cytoskeleton structural molecule activity structural constituent of synapse structural constituent of postsynaptic actin cytoskeleton binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding enzyme regulator activity molecular function regulator activity nitric-oxide synthase regulator activity nitric-oxide synthase binding protein binding enzyme binding identical protein binding cytoskeletal protein binding kinesin binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding Tat protein binding kinase binding protein kinase binding transporter regulator activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	cellular response to nitrogen compound cellular response to stimulus response to cytochalasin B response to stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to cytochalasin B cellular response to chemical stimulus response to chemical cellular process regulation of localization import into cell cellular localization cellular response to nitrogen compound cellular response to stimulus response to cytochalasin B response to stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to cytochalasin B cellular response to chemical stimulus response to chemical cellular process regulation of localization import into cell cellular localization regulation of cellular process regulation of cellular component organization transport synaptic vesicle cycle regulation of synaptic vesicle recycling vesicle-mediated transport presynaptic endocytosis vesicle-mediated transport in synapse cellular component organization localization synaptic vesicle recycling regulation of synaptic vesicle endocytosis establishment of localization in cell cellular component organization or biogenesis regulation of endocytosis synaptic vesicle endocytosis regulation of biological process regulation of transport biological regulation regulation of vesicle-mediated transport establishment of localization endocytosis multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development system development developmental process plasma membrane bounded cell projection organization nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development tissue morphogenesis epithelium development morphogenesis of a polarized epithelium morphogenesis of an epithelium tissue development regulation of DNA recombination regulation of double-strand break repair regulation of cellular response to stress positive regulation of biological process positive regulation of double-strand break repair via homologous recombination regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of response to stimulus positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress recombinational repair positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process double-strand break repair via homologous recombination positive regulation of cellular process DNA repair positive regulation of DNA recombination double-strand break repair DNA recombination primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process positive regulation of double-strand break repair regulation of DNA repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process DNA damage response regulation of response to stimulus metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process monoamine transport norepinephrine transport nitrogen compound transport organic hydroxy compound transport organic cation transport catecholamine uptake catecholamine transport regulation of norepinephrine uptake norepinephrine uptake establishment or maintenance of cell polarity protein localization to cell periphery regulation of protein localization protein localization to plasma membrane regulation of protein localization to cell periphery localization within membrane protein localization to membrane regulation of cellular localization macromolecule localization intracellular protein localization regulation of protein localization to plasma membrane regulation of protein localization to membrane cell motility adherens junction organization adherens junction assembly cellular component biogenesis cell junction organization cellular component assembly cell junction assembly cell-cell junction assembly cell-cell junction organization transepithelial transport regulation of transepithelial transport apical protein localization protein localization to cell junction protein localization to adherens junction protein localization to cell-cell junction cell cycle regulation of cell cycle	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol apical part of cell cluster of actin-based cell projections brush border synapse cell junction glutamatergic synapse apical junction complex cell-cell junction anchoring junction adherens junction axon neuron projection axon terminus presynapse distal axon calyx of Held neuron projection terminus polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex cell cortex cortical cytoskeleton cell periphery focal adhesion cell-substrate junction postsynapse postsynaptic cytoskeleton postsynaptic actin cytoskeleton protein-containing complex catalytic complex NuA4 histone acetyltransferase complex chromatin chromosome transferase complex H4/H2A histone acetyltransferase complex histone acetyltransferase complex acetyltransferase complex H4 histone acetyltransferase complex protein acetyltransferase complex intracellular protein-containing complex dense body plasma membrane protein-DNA complex nucleosome cytoplasmic ribonucleoprotein granule ribonucleoprotein granule Schaffer collateral - CA1 synapse tight junction ribonucleoprotein complex membrane-bounded organelle nucleus intracellular membrane-bounded organelle
J	Actin related protein 10 homolog	-	establishment of organelle localization cellular localization organelle transport along microtubule transport localization mitochondrion localization mitochondrion transport along microtubule organelle localization establishment of localization in cell transport along microtubule axonal transport of mitochondrion establishment of mitochondrion localization retrograde axonal transport intracellular transport establishment of organelle localization cellular localization organelle transport along microtubule transport localization mitochondrion localization mitochondrion transport along microtubule organelle localization establishment of localization in cell transport along microtubule axonal transport of mitochondrion establishment of mitochondrion localization retrograde axonal transport intracellular transport axonal transport establishment of localization establishment of mitochondrion localization, microtubule-mediated axo-dendritic transport microtubule-based transport cytoskeleton-dependent intracellular transport cellular process microtubule-based movement microtubule-based process retrograde axonal transport of mitochondrion	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton neuron projection cytoplasm axon protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton neuron projection cytoplasm axon cell projection axon cytoplasm neuron projection cytoplasm plasma membrane bounded cell projection
N	Dynactin Subunit 2	-	-	-
O, P	Dynactin Subunit 3	-	-	-
S [auth U]	Dynactin 6	protein-containing complex binding binding dynein complex binding	microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization cellular component organization organelle organization mitotic cell cycle process cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome centrosome microtubule organizing center
T [auth V]	Dynactin subunit 5	-	developmental process heart development multicellular organismal process animal organ development ventricular septum development circulatory system development multicellular organism development cardiac septum development cardiac chamber development anatomical structure development cardiac ventricle development system development coronary vasculature development vasculature development developmental process heart development multicellular organismal process animal organ development ventricular septum development circulatory system development multicellular organism development cardiac septum development cardiac chamber development anatomical structure development cardiac ventricle development system development coronary vasculature development vasculature development blood vessel development artery development aorta development	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system organelle envelope nuclear envelope organelle membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen centrosome microtubule organizing center
U [auth Y]	Dynactin Subunit 4	-	-	-
V [auth Z]	Dynactin Subunit 1	-	-	-
W [auth a]	Dynactin subunit 2	-	microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization cellular component organization organelle organization mitotic cell cycle process cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm catalytic complex dynein complex centrosome microtubule organizing center polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
X [auth b], Y [auth c], Z [auth d]	Dynactin subunit 2	-	microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization cellular component organization organelle organization mitotic cell cycle process cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm catalytic complex dynein complex centrosome microtubule organizing center polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
AA [auth e], BA [auth f]	Cytoplasmic dynein 1 heavy chain 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding dynein light intermediate chain binding protein binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity minus-end-directed microtubule motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity dynein intermediate chain binding identical protein binding RNA binding nucleic acid binding	cellular process cell division establishment of organelle localization cellular localization transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration cellular component biogenesis cellular component organization cellular process cell division establishment of organelle localization cellular localization transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration cellular component biogenesis cellular component organization organelle organization cellular component assembly organelle assembly P-body assembly membraneless organelle assembly cellular component organization or biogenesis stress granule assembly microtubule cytoskeleton organization spindle localization establishment of spindle localization microtubule-based process cell cycle cytoskeleton organization cell cycle process regulation of localization regulation of biological process biological regulation metaphase chromosome alignment chromosome localization nuclear chromosome segregation regulation of metaphase plate congression chromosome segregation positive regulation of organelle organization regulation of cytoskeleton organization regulation of cellular component organization regulation of cellular process positive regulation of cellular component organization positive regulation of biological process positive regulation of spindle assembly positive regulation of cell cycle process regulation of cell cycle positive regulation of cellular process spindle organization regulation of cell cycle process positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization regulation of microtubule-based process regulation of spindle organization regulation of cellular component biogenesis spindle assembly regulation of organelle organization positive regulation of cell cycle regulation of spindle assembly regulation of organelle assembly regulation of microtubule cytoskeleton organization positive regulation of organelle assembly regulation of mitotic spindle organization mitotic cell cycle microtubule cytoskeleton organization involved in mitosis mitotic spindle organization mitotic cell cycle process cytoplasmic microtubule organization supramolecular fiber organization multicellular organismal process homeostatic process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis positive regulation of cold-induced thermogenesis positive regulation of multicellular organismal process regulation of multicellular organismal process regulation of transport positive regulation of transport regulation of cellular localization positive regulation of intracellular transport regulation of intracellular transport retrograde axonal transport axonal transport axo-dendritic transport microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement	cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol protein-containing complex cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cytoskeleton membraneless organelle microtubule associated complex microtubule cytoskeleton cell projection actin-based cell projection filopodium plasma membrane bounded cell projection polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex neuron projection cytoplasm axon axon cytoplasm neuron projection cell periphery cell cortex centrosome microtubule organizing center lytic vacuole intracellular vesicle membrane-enclosed lumen cytoplasmic vesicle lumen vacuolar lumen endomembrane system intracellular organelle lumen cytoplasmic vesicle lysosome vesicle lumen azurophil granule vacuole intracellular membrane-bounded organelle secretory granule lumen azurophil granule lumen organelle lumen secretory granule primary lysosome secretory vesicle cytoplasmic microtubule
CA [auth g], DA [auth h]	Cytoplasmic dynein 1 intermediate chain 2	protein binding binding dynein heavy chain binding dynein light chain binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity	microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization positive regulation of transport regulation of cellular localization establishment of localization in cell positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport	membrane-bounded organelle cellular anatomical structure organelle vesicle intracellular organelle centrosome microtubule organizing center intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytoplasm cytosol membrane-bounded organelle cellular anatomical structure organelle vesicle intracellular organelle centrosome microtubule organizing center intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytoplasm cytosol protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
EA [auth j]	Cytoplasmic dynein 1 light intermediate chain 2	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding dynein heavy chain binding identical protein binding	microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization positive regulation of transport regulation of cellular localization establishment of localization in cell positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport centrosome localization microtubule organizing center localization cellular component organization organelle organization microtubule cytoskeleton organization cellular component organization or biogenesis cytoskeleton organization cellular response to endogenous stimulus cellular response to growth factor stimulus response to stimulus response to endogenous stimulus cellular response to nerve growth factor stimulus response to nerve growth factor response to growth factor	cellular anatomical structure membrane intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cellular anatomical structure membrane intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton cytoplasm cytosol membrane-bounded organelle endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system cytoplasmic vesicle late endosome vesicle protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer
IA [auth 5], JA [auth 6]	BICD2N	-	-	-
Q, R	Dynactin Subunit 2	-	-	-
M	Dynactin Subunit 2	-	-	-
L	F-actin capping protein beta subunit	cytoskeletal protein binding actin binding protein binding binding	cellular component organization organelle organization cellular process cellular component organization or biogenesis cytoskeleton organization developmental process anatomical structure morphogenesis regulation of biological process regulation of developmental process anatomical structure development biological regulation cell morphogenesis regulation of cell morphogenesis regulation of anatomical structure morphogenesis cellular component organization organelle organization cellular process cellular component organization or biogenesis cytoskeleton organization developmental process anatomical structure morphogenesis regulation of biological process regulation of developmental process anatomical structure development biological regulation cell morphogenesis regulation of cell morphogenesis regulation of anatomical structure morphogenesis regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly barbed-end actin filament capping negative regulation of cellular component organization actin filament organization regulation of organelle organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly negative regulation of cellular process protein-containing complex assembly negative regulation of protein polymerization regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization protein-containing complex organization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization regulation of cellular component biogenesis negative regulation of organelle organization regulation of actin filament length regulation of actin cytoskeleton organization negative regulation of actin filament depolymerization protein depolymerization regulation of anatomical structure size	protein-containing complex cellular anatomical structure intracellular anatomical structure WASH complex cytoplasm intracellular membraneless organelle sarcomere intracellular organelle organelle membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer protein-containing complex cellular anatomical structure intracellular anatomical structure WASH complex cytoplasm intracellular membraneless organelle sarcomere intracellular organelle organelle membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex cytoskeleton F-actin capping protein complex actin cytoskeleton
K	Capping protein (Actin filament) muscle Z-line, alpha 1	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding	regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly regulation of biological process barbed-end actin filament capping negative regulation of cellular component organization actin filament organization regulation of organelle organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process cellular component organization regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly negative regulation of cellular process protein-containing complex assembly negative regulation of protein polymerization cellular component organization or biogenesis regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization protein-containing complex organization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization biological regulation regulation of cellular component biogenesis organelle organization negative regulation of organelle organization regulation of actin filament length regulation of actin cytoskeleton organization cellular process negative regulation of actin filament depolymerization protein depolymerization cytoskeleton organization regulation of anatomical structure size	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle protein-containing complex cytoskeleton organelle membraneless organelle F-actin capping protein complex intracellular membraneless organelle actin cytoskeleton cell cortex cortical cytoskeleton cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle protein-containing complex cytoskeleton organelle membraneless organelle F-actin capping protein complex intracellular membraneless organelle actin cytoskeleton cell cortex cortical cytoskeleton cell periphery
HA [auth z]	Dynactin Subunit 1	-	-	-
FA [auth k], GA [auth l]	Dynein light chain roadblock-type 1	microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity protein binding binding dynein intermediate chain binding identical protein binding	microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization microtubule-based movement microtubule-based process cellular process regulation of localization regulation of biological process cellular localization regulation of cellular process transport regulation of transport biological regulation positive regulation of biological process intracellular transport establishment of localization localization positive regulation of transport regulation of cellular localization establishment of localization in cell positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport response to light stimulus behavior multicellular organismal process response to stimulus visual behavior response to radiation response to abiotic stimulus	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection membrane intracellular organelle centrosome microtubule organizing center intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection membrane intracellular organelle centrosome microtubule organizing center intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton ciliary tip cytoplasm protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
A, B, C, D, E A, B, C, D, E, F, G, I	ARP1 actin related protein 1 homolog A	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	-	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton cell periphery cell cortex protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton cell periphery cell cortex cytoplasm centrosome microtubule organizing center

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H	IPR020902	Actin/actin-like conserved site	Conserved Site
H	IPR004001	Actin, conserved site	Conserved Site
H	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
H	IPR004000	Actin family	Family
J	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
J	IPR004000	Actin family	Family
S [auth U]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
S [auth U]	IPR027777	Dynactin subunit 6	Family
T [auth V]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
T [auth V]	IPR047125	Dynactin subunit 5	Family
W [auth a]	IPR028133	Dynamitin	Family
X [auth b], Y [auth c], Z [auth d]	IPR028133	Dynamitin	Family
AA [auth e], BA [auth f]	IPR026983	Dynein heavy chain	Family
AA [auth e], BA [auth f]	IPR013602	Dynein heavy chain, linker	Domain
AA [auth e], BA [auth f]	IPR041658	Dynein heavy chain, AAA lid domain	Domain
AA [auth e], BA [auth f]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AA [auth e], BA [auth f]	IPR042222	Dynein heavy chain, domain 2, N-terminal	Homologous Superfamily
AA [auth e], BA [auth f]	IPR043160	Dynein heavy chain, C-terminal domain, barrel region	Homologous Superfamily
AA [auth e], BA [auth f]	IPR042219	Dynein heavy chain, AAA lid domain superfamily	Homologous Superfamily
AA [auth e], BA [auth f]	IPR035706	Dynein heavy chain, ATP-binding dynein motor region	Domain
AA [auth e], BA [auth f]	IPR041228	Dynein heavy chain, C-terminal domain	Domain
AA [auth e], BA [auth f]	IPR054354	Dynein 2 heavy chain 1, cytoplasmic, ATPase lid domain	Domain
AA [auth e], BA [auth f]	IPR003593	AAA+ ATPase domain	Domain
AA [auth e], BA [auth f]	IPR041466	Dynein heavy chain, AAA 5 extension domain	Domain
AA [auth e], BA [auth f]	IPR042228	Dynein heavy chain, linker, subdomain 3	Homologous Superfamily
AA [auth e], BA [auth f]	IPR035699	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Domain
AA [auth e], BA [auth f]	IPR024743	Dynein heavy chain, coiled coil stalk	Domain
AA [auth e], BA [auth f]	IPR013594	Dynein heavy chain, tail	Domain
AA [auth e], BA [auth f]	IPR043157	Dynein heavy chain, AAA1 domain, small subdomain	Homologous Superfamily
AA [auth e], BA [auth f]	IPR004273	Dynein heavy chain, D6 P-loop domain	Domain
AA [auth e], BA [auth f]	IPR024317	Dynein heavy chain, AAA module D4	Domain
CA [auth g], DA [auth h]	IPR025956	Cytoplasmic dynein 1 intermediate chain 1/2	Family
CA [auth g], DA [auth h]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
CA [auth g], DA [auth h]	IPR001680	WD40 repeat	Repeat
CA [auth g], DA [auth h]	IPR050687	Dynein axonemal intermediate chain 1/2/3/4	Family
CA [auth g], DA [auth h]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
EA [auth j]	IPR022780	Dynein family light intermediate chain	Family
EA [auth j]	IPR008467	Dynein 1 light intermediate chain	Family
EA [auth j]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
L	IPR019771	F-actin capping protein, beta subunit, conserved site	Conserved Site
L	IPR001698	F-actin-capping protein subunit beta	Family
L	IPR043175	F-actin-capping protein subunit beta, N-terminal domain	Homologous Superfamily
L	IPR037282	F-actin-capping protein subunit alpha/beta	Homologous Superfamily
L	IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	Homologous Superfamily
K	IPR002189	F-actin-capping protein subunit alpha	Family
K	IPR042489	F-actin capping protein, alpha subunit, domain 1	Homologous Superfamily
K	IPR037282	F-actin-capping protein subunit alpha/beta	Homologous Superfamily
K	IPR017865	F-actin capping protein, alpha subunit, conserved site	Conserved Site
K	IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	Homologous Superfamily
FA [auth k], GA [auth l]	IPR016561	Dynein light chain roadblock-type 1/2	Family
FA [auth k], GA [auth l]	IPR004942	Roadblock/LAMTOR2 domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, I	IPR020902	Actin/actin-like conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, I	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, I	IPR004000	Actin family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
AA [auth e], BA [auth f]	Pharos: Q14204	Charcot-Marie-Tooth disease intellectual disability, autosomal dominant 13 Charcot-Marie-Tooth disease axonal type 2O intellectual disability microcephaly autosomal dominant childhood-onset proximal spinal muscular atrophy without contractures peripheral neuropathy spinal muscular atrophy, type III Mental Retardation, Psychosocial motor peripheral neuropathy neurodegenerative disease peripheral nervous system disease astrocytic tumor cerebral cortical dysplasia lung cancer Charcot-Marie-Tooth disease intellectual disability, autosomal dominant 13 Charcot-Marie-Tooth disease axonal type 2O intellectual disability microcephaly autosomal dominant childhood-onset proximal spinal muscular atrophy without contractures peripheral neuropathy spinal muscular atrophy, type III Mental Retardation, Psychosocial motor peripheral neuropathy neurodegenerative disease peripheral nervous system disease astrocytic tumor cerebral cortical dysplasia lung cancer malignant mesothelioma osteosarcoma spinal muscular atrophy, type 1 thyroid gland papillary carcinoma diabetes mellitus familial nonmedullary thyroid carcinoma microlissencephaly ovarian cancer Pick disease spinal muscular atrophy juvenile dermatomyositis malignant ependymoma
CA [auth g], DA [auth h]	Pharos: Q13409	Beckwith-Wiedemann syndrome
EA [auth j]	Pharos: O43237	Weight Gain juvenile dermatomyositis medulloblastoma ovarian cancer large cell medulloblastoma myopathy pancreatic ductal adenocarcinoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
FA [auth k], GA [auth l]	Pharos: Q9NP97	melanoma pancreatic intraductal papillary-mucinous neoplasm osteosarcoma plasma cell myeloma ovarian cancer psoriasis