6EQZ | pdb_00006eqz

A MamC-MIC insertion in MBP scaffold at position K170

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6eqza1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
A	d6eqza2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
D [auth G]	d6eqzg1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
D [auth G]	d6eqzg2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
C [auth D]	d6eqzd1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
C [auth D]	d6eqzd2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
B	d6eqzb1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
B	d6eqzb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli O157:H7 ) [TaxId: 83334 ], (Paramagnetospirillum magneticum AMB-1 ) [TaxId: 342108 ], (Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	RNA_pol_Rpb1_5	e6eqzA1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: RNA_pol_Rpb1_5	ECOD (v294.1)
D [auth G]	RNA_pol_Rpb1_5	e6eqzG1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: RNA_pol_Rpb1_5	ECOD (v294.1)
C [auth D]	RNA_pol_Rpb1_5	e6eqzD1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: RNA_pol_Rpb1_5	ECOD (v294.1)
C [auth D]	Ald_deCOase	e6eqzD2	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: Ald_deCOase	ECOD (v294.1)
B	RNA_pol_Rpb1_5	e6eqzB1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: RNA_pol_Rpb1_5	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth G]	PF01547	Bacterial extracellular solute-binding protein (SBP_bac_1)	Bacterial extracellular solute-binding protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth G]	Maltose-binding periplasmic protein,Tightly bound bacterial magnetic particle protein,Maltose-binding periplasmic protein	transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding cation binding ion binding metal ion binding small molecule binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility locomotion localization transport carbohydrate transport oligosaccharide transport disaccharide transport establishment of localization maltose transport polysaccharide localization dextrin transport macromolecule localization maltodextrin transmembrane transport polysaccharide transport response to disaccharide response to oxygen-containing compound detection of maltose stimulus detection of stimulus response to carbohydrate detection of chemical stimulus detection of disaccharide stimulus response to maltose detection of carbohydrate stimulus	ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex extracellular region ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex extracellular region periplasmic space outer membrane-bounded periplasmic space cell envelope magnetosome membrane-bounded organelle intracellular organelle magnetosome membrane intracellular anatomical structure organelle intracellular membrane-bounded organelle organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth G]	IPR006061	Solute-binding family 1, conserved site	Conserved Site
A, B, C [auth D], D [auth G]	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
A, B, C [auth D], D [auth G]	IPR006059	Bacterial-type extracellular solute-binding protein	Family
A, B, C [auth D], D [auth G]	IPR058956	Magnetosome protein MamC	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.