6EM4

State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth y]SCOP2B SuperfamilyPentein8036230 3000640 SCOP2B (2022-06-29)
K [auth B]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
L [auth C]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
L [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
N [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
O [auth f]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
P [auth G]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
B [auth F]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
B [auth F]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
V [auth N]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
X [auth P]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
Y [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
AA [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
BA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
HA [auth o]SCOP2B SuperfamilyRNA-binding domain RBD8061969 3000110 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth y]eIF-6e6em4y1 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: eIF-6ECOD (1.6)
K [auth B]Ribosomal_L3e6em4B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
L [auth C]Ribosomal_L4e6em4C3 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
L [auth C]Ribos_L4_asso_Ce6em4C2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
M [auth e]Ribosomal_L32ee6em4e1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
N [auth E]Ribosomal_L6ee6em4E1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
O [auth f]Ribosomal_L35Aee6em4f1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
P [auth G]Ribosomal_L7Ae_1e6em4G1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
Q [auth h]Ribosomal_L29_2e6em4h1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
R [auth i]Ribosomal_L36ee6em4i1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
S [auth j]Ribosomal_L37ee6em4j1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
B [auth F]Ribosomal_L30_1e6em4F1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
T [auth L]Ribosomal_L13ee6em4L1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
U [auth M]Ribosomal_L14ee6em4M1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
V [auth N]Ribosomal_L15ee6em4N1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
W [auth O]Ribosomal_L13e6em4O1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
X [auth P]Ribosomal_L22e6em4P1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
Y [auth Q]Ribosomal_L18e6em4Q1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Z [auth S]Ribosomal_L18Ae6em4S1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
AA [auth V]Ribosomal_L14e6em4V1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
BA [auth Y]Ribosomal_L26e6em4Y1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
EA [auth D]UNK_F_TYPEe6em4D1 A: alpha duplicates or obligate multimersX: RNA helicase Hera dimerization domain (From Topology)H: RNA helicase Hera dimerization domain (From Topology)T: RNA helicase Hera dimerization domainF: UNK_F_TYPEECOD (1.6)
EA [auth D]Helicase_C_1e6em4D2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_1ECOD (1.6)
FA [auth K]Ribosomal_L1_2nde6em4K1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2ndECOD (1.6)
FA [auth K]Ribosomal_L1_1st_1e6em4K2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
IA [auth t]Ribosomal_L30_1e6em4t1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
E [auth 5]ANAPC4_WD40_11e6em451 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_11ECOD (1.6)
F [auth A]Brixe6em4A1 A: a/b three-layered sandwichesX: Anticodon-binding domain of Class II aaRS (From Topology)H: Anticodon-binding domain of Class II aaRS (From Topology)T: Anticodon-binding domain of Class II aaRSF: BrixECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth x]PF04427Brix domain (Brix)Brix domain- Domain
J [auth y]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
K [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
L [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
L [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
M [auth e]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
N [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
O [auth f]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
P [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
Q [auth h]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
R [auth i]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
S [auth j]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
B [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
B [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
T [auth L]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
U [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
U [auth M]PF00467KOW motif (KOW)KOW motif- Family
V [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
W [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
X [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Y [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Z [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
AA [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
BA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
C [auth 3]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
C [auth 3]PF04874Mak16 protein C-terminal region (Mak16)Mak16 protein C-terminal region- Family
EA [auth D]PF13959Domain of unknown function (DUF4217) (DUF4217)Domain of unknown function (DUF4217)This short domain is found at the C-terminus of many helicase proteins.Domain
FA [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
GA [auth n]PF16589BRCT domain, a BRCA1 C-terminus domain (BRCT_2)BRCT domain, a BRCA1 C-terminus domain- Family
HA [auth o]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
IA [auth t]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
KA [auth H]PF08145BOP1NT (NUC169) domain (BOP1NT)BOP1NT (NUC169) domainThis N terminal domain is found in BOP1-like WD40 proteins [1].Domain
D [auth 4]PF05997Nucleolar protein,Nop52 (Nop52)Nucleolar protein,Nop52- Family
F [auth A]PF04427Brix domain (Brix)Brix domain- Domain
G [auth J]PF05890Eukaryotic rRNA processing protein EBP2 (Ebp2)Eukaryotic rRNA processing protein EBP2- Family
H [auth u]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
I [auth v]PF09420Ribosome biogenesis protein Nop16 (Nop16)Ribosome biogenesis protein Nop16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth x]Ribosome production factor 1
J [auth y]Eukaryotic translation initiation factor 6
K [auth B]60S ribosomal protein L3
L [auth C]60S ribosomal protein L4-A
M [auth e]60S ribosomal protein L32
N [auth E]60S ribosomal protein L6-A
O [auth f]60S ribosomal protein L33-A
P [auth G]60S ribosomal protein L8-A
Q [auth h]60S ribosomal protein L35-A
R [auth i]60S ribosomal protein L36-B
S [auth j]60S ribosomal protein L37-A
B [auth F]60S ribosomal protein L7-A
T [auth L]60S ribosomal protein L13-A
U [auth M]60S ribosomal protein L14-A
V [auth N]60S ribosomal protein L15-A
W [auth O]60S ribosomal protein L16-A
X [auth P]60S ribosomal protein L17-A
Y [auth Q]60S ribosomal protein L18-A
Z [auth S]60S ribosomal protein L20-A
AA [auth V]60S ribosomal protein L23-A
BA [auth Y]60S ribosomal protein L26-A
CA [auth 1]25S ribosomal RNA---
C [auth 3]Protein MAK16-
DA [auth 2]5.8S ribosomal RNA---
EA [auth D]ATP-dependent RNA helicase HAS1
FA [auth K]Proteasome-interacting protein CIC1
GA [auth n]Pescadillo homolog
HA [auth o]Ribosome biogenesis protein 15
IA [auth t]Ribosome biogenesis protein RLP7
JA [auth 6]internal transcribed spacer 1---
KA [auth H]Ribosome biogenesis protein ERB1
D [auth 4]Ribosomal RNA-processing protein 1-
E [auth 5]Ribosome biogenesis protein NSA1-
F [auth A]Ribosome biogenesis protein BRX1
G [auth J]rRNA-processing protein EBP2
H [auth u]Ribosome biogenesis protein RLP24
I [auth v]Nucleolar protein 16-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth x]IPR044281U3 snoRNP protein/Ribosome production factor 1Family
A [auth x]IPR007109Brix domainDomain
J [auth y]IPR002769Translation initiation factor IF6Family
K [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
K [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
K [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
K [auth B]IPR000597Large ribosomal subunit protein uL3Family
K [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
L [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
L [auth C]IPR002136Large ribosomal subunit protein uL4Family
L [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
L [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
L [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
M [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
M [auth e]IPR001515Large ribosomal subunit protein eL32Family
M [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
N [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
N [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
N [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth E]IPR000915Large ribosomal subunit protein eL6Family
O [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
O [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
O [auth f]IPR001780Large ribosomal subunit protein eL33Family
O [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
P [auth G]IPR001921Large ribosomal subunit protein eL8Family
P [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
P [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
P [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
P [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
Q [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
Q [auth h]IPR001854Large ribosomal subunit protein uL29Family
Q [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Q [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
R [auth i]IPR000509Large ribosomal subunit protein eL36Family
R [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
S [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
S [auth j]IPR001569Large ribosomal subunit protein eL37Family
S [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
S [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
B [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
B [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
B [auth F]IPR039699Large ribosomal subunit protein uL30Family
B [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
B [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
B [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
T [auth L]IPR001380Large ribosomal subunit protein eL13Family
T [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
U [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth M]IPR039660Large ribosomal subunit protein eL14Family
U [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
U [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
U [auth M]IPR005824KOWDomain
V [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
V [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
V [auth N]IPR000439Large ribosomal subunit protein eL15Family
W [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
W [auth O]IPR005822Large ribosomal subunit protein uL13Family
W [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
W [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
X [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
X [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
X [auth P]IPR001063Large ribosomal subunit protein uL22Family
X [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
Y [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Y [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
Y [auth Q]IPR000039Large ribosomal subunit protein eL18Family
Y [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Z [auth S]IPR028877Large ribosomal subunit protein eL20Family
Z [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
Z [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AA [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
AA [auth V]IPR000218Large ribosomal subunit protein uL14Family
AA [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
BA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth Y]IPR005824KOWDomain
BA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
BA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
C [auth 3]IPR006958Mak16 proteinFamily
C [auth 3]IPR029004Ribosomal eL28/Mak16Domain
EA [auth D]IPR000629ATP-dependent RNA helicase DEAD-box, conserved siteConserved Site
EA [auth D]IPR014014RNA helicase, DEAD-box type, Q motifDomain
EA [auth D]IPR011545DEAD/DEAH box helicase domainDomain
EA [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EA [auth D]IPR001650Helicase, C-terminal domain-likeDomain
EA [auth D]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
EA [auth D]IPR044773DDX18/Has1, DEAD-box helicase domainDomain
EA [auth D]IPR025313Domain of unknown function DUF4217Domain
FA [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
FA [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
GA [auth n]IPR010613PescadilloFamily
GA [auth n]IPR001357BRCT domainDomain
GA [auth n]IPR036420BRCT domain superfamilyHomologous Superfamily
HA [auth o]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HA [auth o]IPR000504RNA recognition motif domainDomain
HA [auth o]IPR034469Ribosome biogenesis protein 15, RNA recognition motifDomain
HA [auth o]IPR035979RNA-binding domain superfamilyHomologous Superfamily
IA [auth t]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
IA [auth t]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IA [auth t]IPR039699Large ribosomal subunit protein uL30Family
IA [auth t]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IA [auth t]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
KA [auth H]IPR019775WD40 repeat, conserved siteConserved Site
KA [auth H]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
KA [auth H]IPR028598WD repeat BOP1/Erb1Family
KA [auth H]IPR001680WD40 repeatRepeat
KA [auth H]IPR012953BOP1, N-terminal domainDomain
KA [auth H]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth 4]IPR010301Ribosomal RNA processing protein 1Family
E [auth 5]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
E [auth 5]IPR037379WDR74/Nsa1Family
F [auth A]IPR026532Ribosome biogenesis protein BRX1Family
F [auth A]IPR007109Brix domainDomain
G [auth J]IPR008610Eukaryotic rRNA processingFamily
H [auth u]IPR011017TRASH domainDomain
H [auth u]IPR000988Large ribosomal subunit protein eL24-relatedFamily
H [auth u]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
I [auth v]IPR019002Ribosome biogenesis protein Nop16Family